Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 244 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Dickeya dadantii 3937

 Score =  326 bits (835), Expect = 3e-94
 Identities = 162/242 (66%), Positives = 197/242 (81%)

Query: 5   DIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDEKA 64
           +II+GIHAV+ALL+  P+R +E++ L+GRED RL PLI + +A G ++QV +R+ LD+K 
Sbjct: 3   EIIYGIHAVKALLEQDPQRFLEVFTLKGREDRRLQPLIAELEANGIAVQVANRQWLDDKV 62

Query: 65  ESTQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLILDGVTDPHNLGACLRNADAAGVQ 124
           E   HQGIVARVK  +   E+DL  LLA  D PFLL+LDGVTDPHNLGACLR+ADAAGV 
Sbjct: 63  EGAVHQGIVARVKEGRQYQENDLPGLLASLDTPFLLVLDGVTDPHNLGACLRSADAAGVH 122

Query: 125 GIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADCEL 184
            +IVP+D S  L A   KVACGAAETVPL +VTNLART+R LQE+ VWIVGTAGEAD  L
Sbjct: 123 AVIVPRDRSAQLNATAKKVACGAAETVPLIRVTNLARTLRFLQEQNVWIVGTAGEADHTL 182

Query: 185 YQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAVRQR 244
           YQ+ L GPLA+ MGAEG+G+RRL+RE CD L+SIPM+GSVSSLNVSVATG+CLFEAVRQR
Sbjct: 183 YQSKLTGPLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGVCLFEAVRQR 242

Query: 245 RS 246
           ++
Sbjct: 243 QA 244