Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  205 bits (521), Expect = 5e-57
 Identities = 130/355 (36%), Positives = 205/355 (57%), Gaps = 3/355 (0%)

Query: 29  SLVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEGDLSYQLDEKDAGVFN 88
           SL+TS  LLA + + ALA  LI    ++ + LRQ    A  + +GDLS     +      
Sbjct: 296 SLLTSVALLA-MVVGALAAWLI--TLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMG 352

Query: 89  SVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAMT 148
            +  S+  M   +   I  +      + + AT +   SE  K  + +Q  +T+  ATAM 
Sbjct: 353 QLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMN 412

Query: 149 QMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLAA 208
           QM +TVQEV+QNA   + AA  A   A+ GD+++   + +I  +  Q+    + ++HLA 
Sbjct: 413 QMSATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAG 472

Query: 209 DTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATAE 268
           ++  I SI++ I  V+EQTNLLALNAAIE+ARAGE GRGFAVVADEVR LA+RTS AT E
Sbjct: 473 ESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEE 532

Query: 269 IQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIATA 328
           I Q I +L  G  +   ++  + ++ +++  +  +A  +L +I   V SI  M+ QIATA
Sbjct: 533 IGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATA 592

Query: 329 SEEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRFHV 383
           SEEQ  VAE+IN+++  + +++ + +  +  T  SS ++  + Q++  ++ RF +
Sbjct: 593 SEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647