Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  197 bits (502), Expect = 8e-55
 Identities = 117/330 (35%), Positives = 180/330 (54%), Gaps = 8/330 (2%)

Query: 27  LYSLVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEG--DLSYQLDEKDA 84
           L SL+     L +L L+ L          L+R +R++  A   +G G  DLS++LD+   
Sbjct: 293 LTSLIGGAVALVSLLLVVLLA------RGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQ 346

Query: 85  GVFNSVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAA 144
                +    NR  +     I  ++ TSE +++    +  + +   +    Q+  TE+ A
Sbjct: 347 DELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVA 406

Query: 145 TAMTQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIE 204
           TA+ +M  TVQ++++NA   AQA+  A++ A    +++   +  I  M+  I +    + 
Sbjct: 407 TAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVS 466

Query: 205 HLAADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSE 264
            LA +  S+  ++  I  ++EQTNLLALNAAIE+ARAGE GRGFAVVADEVR LA+RT  
Sbjct: 467 QLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQL 526

Query: 265 ATAEIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQ 324
           +T E+QQ I  L+ GA   V  M              ++   SL  I   VE I+DM+HQ
Sbjct: 527 STDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQ 586

Query: 325 IATASEEQHAVAEEINKNISAMAELALKNA 354
           +ATA+EEQ AV EEIN+ +  +++LA + A
Sbjct: 587 VATATEEQSAVTEEINRTVQGISDLARETA 616