Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 461 a.a., peptidoglycan synthetase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  146 bits (369), Expect = 1e-39
 Identities = 109/393 (27%), Positives = 185/393 (47%), Gaps = 15/393 (3%)

Query: 2   HVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQ-GFDPSQLGD 60
           H+H++ + G+ M  LAL    KG +VTGSD  +Y P  ++L   GI   Q G+ P +L D
Sbjct: 8   HIHLIAMGGSIMHNLALALHDKGLKVTGSDDEIYEPAKSRLAAAGILPEQEGWFPEKL-D 66

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
           AG  PD V++G      NP +     L +P  S P+F+ +    ++ V+ + G+HGKTS 
Sbjct: 67  AG--PDAVILGMHARADNPELLRAQELNLPIYSFPEFIYEQSRDKQRVV-IGGSHGKTSI 123

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESA-FFVVEADEYDSAFFDKRSKFVHY 179
           +SM+  +L+  G +  + +G   + F    +L + A   ++E DEY S    +  KF  Y
Sbjct: 124 TSMIMHVLQHIGRKFDYAVGAQLEGFDRMVKLSDDAPVIIIEGDEYLSDPIKRVPKFHLY 183

Query: 180 HPRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWS 239
           H    VI+ + +DH ++F D    + QF       P  G +I+  D   V Q + +    
Sbjct: 184 HHHIGVISGISWDHINVFPDPDIYRDQFRIFAEMTPKAGTLIYNQDDEQV-QLVSV---- 238

Query: 240 EQETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARH 299
            +     S +  G H  ++ D     +     +  G +   L G+HN+ N   A    + 
Sbjct: 239 PRNPADISYIGYGVHEHSIRDG----KTILHTKKDGDVAVQLFGEHNLRNINAAKEVCKK 294

Query: 300 VGVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQTKI 359
           +GV      +AL  F    +RL+ L      ++Y DFAH P+ +  T + ++ +  +  +
Sbjct: 295 IGVKAHDFYEALKTFKGAAKRLQKLGESATANIYRDFAHAPSKVRATTEAVKKQFPERTL 354

Query: 360 TIVLEPRSNTMKSGVHKDTLAHSMLQADEAFLY 392
             VLE  + +  +       A ++  ADE  +Y
Sbjct: 355 VAVLELHTFSSLNKSFIPQYAGALDLADEPIVY 387