Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 459 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Serratia liquefaciens MT49

 Score =  578 bits (1491), Expect = e-169
 Identities = 285/456 (62%), Positives = 346/456 (75%), Gaps = 7/456 (1%)

Query: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60
           M +HILGICGTFMGGLA+LAR+ GH VTGSDANVYPPMST LE++GI+LIQG+DP+QL  
Sbjct: 1   MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIDLIQGYDPAQLDP 60

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
           A   PD+V+IGNAM+RGNPCVEAVL  GIPY SGPQ+L D++L +RWVLAV+GTHGKT+T
Sbjct: 61  A---PDLVIIGNAMTRGNPCVEAVLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTT 117

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180
           + M  WILE CGYQPGF+IGGVP NF VSARLG S FFV+EADEYD AFFDKRSKFVHY 
Sbjct: 118 AGMATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEADEYDCAFFDKRSKFVHYS 177

Query: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240
           PRTL++NNLEFDHADIF DL AIQKQFHH +R VPG+GK+I P + + +KQ + MGCWSE
Sbjct: 178 PRTLIMNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDNHLKQVMAMGCWSE 237

Query: 241 QETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARHV 300
           QE          W A+ L+ D   + VF DG+  G + W+L+G+HN+ N +MAIAA RHV
Sbjct: 238 QELVGEE---GAWRAQKLTPDASHYAVFLDGEQVGEVKWSLVGEHNMHNGLMAIAATRHV 294

Query: 301 GVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQT-KI 359
           GV P+ A  AL  F+  +RRLEL    +GV+VYDDFAHHPTAI  T+  +R KVG T +I
Sbjct: 295 GVLPADACRALGEFINARRRLELRGEAHGVTVYDDFAHHPTAILATLAALRGKVGGTARI 354

Query: 360 TIVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQADTIDWNMKEAMEAAVIPVTVLHQID 419
             VLEPRSNTMK G+ K+ LA S+ +ADE FL+Q   I W + E  EA V P      +D
Sbjct: 355 LAVLEPRSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVAEACVQPAHWSADLD 414

Query: 420 DVVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALA 455
            +V  +  +A+PGD I+VMSNGGFGG+H +LL ALA
Sbjct: 415 TLVDMIVKTAQPGDHILVMSNGGFGGIHDRLLEALA 450