Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Kangiella aquimarina DSM 16071

 Score =  530 bits (1364), Expect = e-155
 Identities = 261/455 (57%), Positives = 325/455 (71%), Gaps = 6/455 (1%)

Query: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60
           MH+HILGICGTFMGG+ALLA+ +G  V+GSD NVYPPMSTQLEEQGIELIQGFDP  + +
Sbjct: 1   MHIHILGICGTFMGGIALLAKQRGISVSGSDQNVYPPMSTQLEEQGIELIQGFDPKHIPE 60

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
              + D VV+GNAMSRGNP VE VL  G+ Y SGPQ+L ++I+ ++WVLA SGTHGKT+T
Sbjct: 61  ---HTDCVVVGNAMSRGNPSVEYVLEQGLTYRSGPQWLAENIIHDKWVLAASGTHGKTTT 117

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180
           +SMLAWILE     PGFLIGGVP+NFG+SAR+ ES FFVVEADEYD+AFFDKRSKFVHY 
Sbjct: 118 ASMLAWILEYANLNPGFLIGGVPENFGLSARVTESPFFVVEADEYDTAFFDKRSKFVHYR 177

Query: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240
           PRTL++NNLE+DHADIF +L AI+ QFHH +R VPG G VI+P D   ++  +D G WS 
Sbjct: 178 PRTLIMNNLEYDHADIFPNLEAIKTQFHHLLRIVPGNGLVIYPKDDANLQDVVDRGLWSG 237

Query: 241 QETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARHV 300
           +E     +   GW    L DD   FEV+F GQ QG ++W LIG HN+ NA+ AIAAARH 
Sbjct: 238 KELIGDEQ---GWQYTLLQDDGGHFEVYFAGQKQGEVNWPLIGLHNVNNALAAIAAARHA 294

Query: 301 GVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQTKIT 360
           GV      DALA F   KRR+EL     GV VYDDFAHHPTA+ TT+ G RAKVGQ ++ 
Sbjct: 295 GVPAGHCCDALAEFRNVKRRMELKGEAGGVKVYDDFAHHPTAVKTTLDGFRAKVGQQRVI 354

Query: 361 IVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQADTIDWNMKEAMEAAVIPVTVLHQIDD 420
            +++ RS TM+SG+HKDTL  S+  AD+  +++    DW            + +L  +D 
Sbjct: 355 AIVDLRSATMRSGIHKDTLLASLKGADQVIIHKPAEFDWQFPIEQVNDFDNLQILPDVDS 414

Query: 421 VVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALA 455
           ++  +    + GD I+VMSNGGFG +H+KLL  LA
Sbjct: 415 ILNSLKEMVQSGDNILVMSNGGFGAIHQKLLQQLA 449