Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 460 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Dickeya dadantii 3937

 Score =  581 bits (1498), Expect = e-170
 Identities = 289/463 (62%), Positives = 350/463 (75%), Gaps = 7/463 (1%)

Query: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60
           M +HILGICGTFMGGLALLAR++GH+VTGSDANVYPPMST LEEQGI LIQG+DP+QL  
Sbjct: 1   MRIHILGICGTFMGGLALLARSQGHQVTGSDANVYPPMSTLLEEQGITLIQGYDPAQLDP 60

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
           A   PD+V+IGNAM+RGNPCVEAVL   IPY SGPQ+L DH+L ERWV+A++GTHGKT+T
Sbjct: 61  A---PDLVIIGNAMTRGNPCVEAVLEQNIPYMSGPQWLHDHVLRERWVIAIAGTHGKTTT 117

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180
           + M+ WILEDCGYQPGF+IGGVP NF VSARLGES FFVVEADEYD AFFDKRSKFVHY 
Sbjct: 118 AGMVTWILEDCGYQPGFVIGGVPGNFTVSARLGESPFFVVEADEYDCAFFDKRSKFVHYS 177

Query: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240
           PRTL++NNLEFDHADIF DL AIQKQFHH +R VPG+G++I P+    +KQ + MGCWSE
Sbjct: 178 PRTLILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGRIIVPSHDLHLKQVMGMGCWSE 237

Query: 241 QETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARHV 300
           QE      +   W AK ++ D   F+V+ + Q  G + W L+G+HN+ N +MAIAAARHV
Sbjct: 238 QELVGEEGI---WKAKKVTTDASVFQVYLNDQLVGEVSWNLVGEHNMHNGLMAIAAARHV 294

Query: 301 GVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQT-KI 359
           GV P+ A  AL  F+  +RRLEL  T +GVSVYDDFAHHPTAI  T+  +R+KVG T +I
Sbjct: 295 GVTPAEACRALGGFINARRRLELRGTAHGVSVYDDFAHHPTAILATLAALRSKVGGTARI 354

Query: 360 TIVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQADTIDWNMKEAMEAAVIPVTVLHQID 419
             VLEPRSNTMK G  K+ LA ++ +AD  FL+Q   I W + E  +A V P      ID
Sbjct: 355 LAVLEPRSNTMKMGHCKNELAPALGRADGVFLFQPQHIPWQVAEVADACVQPAYWSADID 414

Query: 420 DVVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALAVSPQLVE 462
            +V  ++ +A+PGD I+VMSNGGFG +H KLL AL    Q  +
Sbjct: 415 TLVEMISKTAQPGDHILVMSNGGFGNIHNKLLDALNAKAQAAD 457