Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 253 a.a., ABC-type polysaccharide/polyol phosphate export systems, permease component from Kangiella aquimarina DSM 16071

 Score =  357 bits (915), Expect = e-103
 Identities = 165/250 (66%), Positives = 215/250 (86%)

Query: 7   IAFKSILTKEINRFTRIWVQTLVPPAITMTLYFLIFGNLVGSRIGEMGGVSYMEFIAPGL 66
           +AFK+I+TKEI R+TRIW QTL+PPAITMTLYF+IFGNL+GSR+GEM G  YME+I PGL
Sbjct: 4   VAFKTIVTKEIIRWTRIWSQTLLPPAITMTLYFVIFGNLIGSRVGEMDGFGYMEYIVPGL 63

Query: 67  IMMSVITNSYSNVASSFYSAKFQRNLEELMVAPVPHYVMIAGYVGGGVARGLCVGLIVTL 126
           IMMSVITNSY NV SSF+SAK+QR++EE+MV+PV ++V++ GYVGGGV RGL  G IVT+
Sbjct: 64  IMMSVITNSYGNVVSSFFSAKYQRSIEEMMVSPVSNWVILFGYVGGGVLRGLLTGFIVTI 123

Query: 127 VAMFFVDISLHHAGLVVMTVFLTSVLFSLGGLINAVFAKSFDDISIIPTFVLTPLTYLGG 186
           +A FFVD+ +++  +V+  VFLTSVLF++GG INAVFA+ FDD++I+PTF+LTPLTYLGG
Sbjct: 124 IASFFVDLKIYNYFVVISVVFLTSVLFAIGGFINAVFARKFDDVAIVPTFILTPLTYLGG 183

Query: 187 VFYSLSLLPAFWQGVSALNPVVYMINVFRYGFLGFADISVPLSIGIMVGFCAALWGVAYY 246
           VFYS+SLLP FWQGVS  NP++YM+N FRYGFLG +DI++ ++  +++ F AAL  +A Y
Sbjct: 184 VFYSISLLPEFWQGVSKANPIIYMVNAFRYGFLGASDIAIEVAFALILVFIAALTSLAIY 243

Query: 247 LISRGIGLRS 256
           L++RGIGLR+
Sbjct: 244 LLNRGIGLRA 253