Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., ABC transporter permease from Dickeya dianthicola 67-19

 Score =  363 bits (931), Expect = e-105
 Identities = 174/256 (67%), Positives = 220/256 (85%)

Query: 1   MKQLYFIAFKSILTKEINRFTRIWVQTLVPPAITMTLYFLIFGNLVGSRIGEMGGVSYME 60
           M  LY++A +SI +KEINRF RIW+QTL+PP ITM+LYF+IFGNLVGSRIGEM G SYM+
Sbjct: 1   MMGLYWVALQSIWSKEINRFARIWIQTLLPPVITMSLYFVIFGNLVGSRIGEMNGFSYMQ 60

Query: 61  FIAPGLIMMSVITNSYSNVASSFYSAKFQRNLEELMVAPVPHYVMIAGYVGGGVARGLCV 120
           FI PGLIMMSVITN+Y+NVASSF+SAKFQRN+EEL+VAPVP +++IAGYVGGG+ARG+CV
Sbjct: 61  FIVPGLIMMSVITNAYANVASSFFSAKFQRNIEELLVAPVPTHIIIAGYVGGGMARGICV 120

Query: 121 GLIVTLVAMFFVDISLHHAGLVVMTVFLTSVLFSLGGLINAVFAKSFDDISIIPTFVLTP 180
           G++VT V++ FV + +H   +V +T+ LTS+LFSL GL+NAVFAK+FDDIS+IPTFVLTP
Sbjct: 121 GVLVTAVSLCFVPLHVHAWWMVAVTLLLTSMLFSLAGLLNAVFAKTFDDISLIPTFVLTP 180

Query: 181 LTYLGGVFYSLSLLPAFWQGVSALNPVVYMINVFRYGFLGFADISVPLSIGIMVGFCAAL 240
           LTYLGGVFYSLSLL  FWQ VS LNPVVYMI+ FR+GFLG  D+ + L++ +++ F AA 
Sbjct: 181 LTYLGGVFYSLSLLSPFWQAVSKLNPVVYMISGFRFGFLGIHDVPLSLTLAVLLAFIAAF 240

Query: 241 WGVAYYLISRGIGLRS 256
           + ++++LI RG GLRS
Sbjct: 241 YALSWWLIERGRGLRS 256