Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 666 a.a., putative peptidase from Pseudomonas putida KT2440

 Score =  572 bits (1473), Expect = e-167
 Identities = 315/639 (49%), Positives = 416/639 (65%), Gaps = 31/639 (4%)

Query: 12  LSHVNNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTFAHK 71
           +S   N LELL+PA++     EAI HGADA+YIGGP+FGAR  A N V DIA L  FAH+
Sbjct: 1   MSLPKNHLELLSPARDVAIAREAILHGADAIYIGGPSFGARHNACNEVSDIAELVEFAHR 60

Query: 72  YHAQVFVALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQLNLPPIALHASTQMD 131
           YHA+VF  +NTIL D+EL  A KLI  +Y+AG DALIVQD+GV++L++PPI LHASTQ D
Sbjct: 61  YHARVFTTINTILHDNELEPARKLIHQLYDAGVDALIVQDLGVMELDIPPIELHASTQTD 120

Query: 132 NRNPEKVAFLEQVGFSQVVLARELGLSQIREVAAHTNMQIEFFIHGALCVAYSGLCNLSH 191
            R  E+  FL+Q GFSQ+VLAREL L QIR +AA T+  IEFFIHGALCVA+SG CN+SH
Sbjct: 121 IRTLERAKFLDQAGFSQLVLARELNLQQIRAIAAETDAAIEFFIHGALCVAFSGQCNISH 180

Query: 192 AFSNRSANRGECSQMCRLPGNLKTRQGDVLAKNEHLLSLKDNNQTDNLEALIDAGVRSFK 251
           A + RSANRG+CSQ CRLP  LK  QG V+A  +HLLS+KDNNQT NL  L+DAGVRSFK
Sbjct: 181 AQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNNQTANLADLVDAGVRSFK 240

Query: 252 IEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFVASSHGRTEHTFTPDPEKTFNRGSTDYF 311
           IEGR KD+ YVKN+TAHYR++LDAI+  RP++  +S GRT+H F PDP+KTF+RGSTDYF
Sbjct: 241 IEGRYKDMGYVKNITAHYRKELDAILEDRPQYARASSGRTQHFFLPDPDKTFHRGSTDYF 300

Query: 312 VHERSQGIKDFRSPKYIGQDVGKVVAIGKDFIQVSSTHEFNNGDGLAYFPPNYAMAKQSD 371
           V +R   I  F SP + G  VG V  +GK  +QV +     NGDGL     N  + ++  
Sbjct: 301 VTDRKVDIGAFDSPTFTGLPVGVVEKVGKRDMQVVTDVPLTNGDGL-----NVLVKRE-- 353

Query: 372 DKLQGLRVNRAE--------GHKLHVLQV-PRDLRVGM-------TLYRNHNQAFEALLA 415
             + G R N AE        G K +  +V P ++  G+        L RN +  ++  L 
Sbjct: 354 --VVGFRANIAEPRGEFEEDGQKRYRYRVEPNEMPEGLHKLRPNHPLSRNLDHNWQQALQ 411

Query: 416 KESAKRIIAVDMRLIDTTAGVALTLTDMYGLSASVELAVEKTPATDAEKTLQTIRTQLSK 475
           + S++R + V+   +     + LTL+   G+S  V L      A   ++ L+ +   L +
Sbjct: 412 RTSSERRVGVEWHAVLREQRLMLTLSSEEGVSVQVALDGPFGVANKPQQALEQLHDLLGQ 471

Query: 476 LGSTDFVARQISIETAEPWFLPASTLNGLRRDAVAALELARIEGYQR-PKPWKYNQDAVY 534
           LG+T + A +I ++  + +F+P S L  LRR+A+ AL  AR++ + R  +  +     VY
Sbjct: 472 LGTTLYHADRIELDAPQAYFIPNSQLKALRREAIEALTAARVQAHPRGGRKAETTPPPVY 531

Query: 535 PFKHLSYLGNVANEKAKDFYQRHGVIEIQDTYEKNGVTEDVPLMVTKHCLRFNFNLCPKE 594
           P  HLS+L NV N+KA+DFY RHGV  I   YE +    +VP+M+TKHCLRF+FNLCPK+
Sbjct: 532 PESHLSFLANVYNQKARDFYHRHGVQLIDAAYEAHEEHGEVPVMITKHCLRFSFNLCPKQ 591

Query: 595 VPGI-----KADPMVLEIGNDVLKLVFDCPKCEMLVVGE 628
             G+     K  PM L  G++VL L FDC  CEM V+G+
Sbjct: 592 AKGVTGVRTKVAPMQLIQGDEVLTLKFDCKPCEMHVIGK 630