Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., putative peptidase from Pseudomonas putida KT2440

 Score =  136 bits (342), Expect = 2e-36
 Identities = 116/413 (28%), Positives = 183/413 (44%), Gaps = 58/413 (14%)

Query: 34  AIRHGADAVYIGGPAFGARATAGNSVEDIARLCTFAHKYHA---QVFVALNTILMDDELA 90
           A  +GADAVY G P +  R    N+  D A L     + HA   + +V +N    + +L 
Sbjct: 4   AFAYGADAVYAGQPRYSLRVR--NNEFDHANLALGIEEAHALGKRFYVVVNIAPHNAKLK 61

Query: 91  VAEKLIWDVYNAGADALIVQDMGVLQL---NLPPIALHASTQMDNRNPEKVAFLEQVGFS 147
              K +  V     DALI+ D G++ L   + P + +H S Q +  N   V F +Q+G S
Sbjct: 62  TFLKDLAPVIEMAPDALIMSDPGLIMLVRQHFPQMPVHLSVQANTVNWASVQFWQQLGLS 121

Query: 148 QVVLARELGLSQIREVAAHT-NMQIEFFIHGALCVAYSGLCNLSHAFSNRSANRGECSQM 206
           +V+L+REL L +I E+      M++E F+HGALC+AYSG C LS   + R AN+G C+  
Sbjct: 122 RVILSRELSLDEIEEIRQQVPGMELEVFVHGALCMAYSGRCLLSGYLNKRDANQGTCTNA 181

Query: 207 CRLPGN----LKTRQGDVLA-------------------------------KNEH---LL 228
           CR   +     +   GD++                                ++EH   ++
Sbjct: 182 CRWKYDATPATENATGDIVRQVQPTLGLGAPTDQVFLLQESNRPGTEMPAFEDEHGTYIM 241

Query: 229 SLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFVASSH 288
           + KD     ++E L   GV S KIEGR K   Y       YRQ +D  +A RP F  +  
Sbjct: 242 NAKDLRAIQHVERLALMGVHSLKIEGRTKSHFYCARAVQSYRQAIDDAVAGRP-FDRALM 300

Query: 289 GRTEHTFTPDPEKTFNRGSTDYFVHERSQGIKDFRSPKYIGQDVGKVVAIGKD-FIQVSS 347
           G  E       ++ +  G     VH+  Q  +   S     Q VG++  +  D   +V  
Sbjct: 301 GNLESL----AQRGYTEGFLRRHVHDEYQNYQRGNSVSERQQFVGELTGVRVDGLAEVKV 356

Query: 348 THEFNNGDGLAYFPP----NYAMAKQSDDKLQGLRVNRAEGHKLHVLQVPRDL 396
            + F  GD L    P    ++ + +  + +   + V   +GH ++ L +P  +
Sbjct: 357 KNRFAVGDHLELMTPRGNYHFDLHRLCNRQQHAIEVAPGDGHVVY-LPIPEQV 408