Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 438 a.a., Collagenase and related proteases from Kangiella aquimarina DSM 16071

 Score =  137 bits (345), Expect = 1e-36
 Identities = 116/426 (27%), Positives = 187/426 (43%), Gaps = 62/426 (14%)

Query: 20  ELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGN-SVEDIARLCTFAHKYHAQVFV 78
           ELL+PA        A  +GADAVY G P +  R    +  +++IA     AH    + ++
Sbjct: 5   ELLSPAGTLRNMRYAFAYGADAVYAGQPRYSLRVRNNDFGLDNIAIGIEEAHSQGKKFYI 64

Query: 79  ALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQL---NLPPIALHASTQMDNRNP 135
           A N    + ++      I +V     DALI+ D G++ +     P   +H S Q +  N 
Sbjct: 65  ASNIAPHNSKIKTFMDDIKEVIALNPDALIMSDPGLIMMVREAYPEQEVHLSVQANATNY 124

Query: 136 EKVAFLEQVGFSQVVLARELGLSQIREVAAHT-NMQIEFFIHGALCVAYSGLCNLSHAFS 194
             V F  Q G  +V+L+REL + +I E+  H   M++E F+HGALC+AYSG C LS  F+
Sbjct: 125 ATVKFWYQQGIKRVILSRELSIKEIEEIKTHCPEMELEVFVHGALCMAYSGRCLLSGYFN 184

Query: 195 NRSANRGECSQMCRLPGNL----KTRQGDVLA---------------------------- 222
           +R  N+G C+  CR   +L    +   GD++A                            
Sbjct: 185 HRDPNQGTCTNACRWKYDLHEATQNEAGDIIAVSQSEPTVQTVDPQSVFLLQEKERPGEY 244

Query: 223 ----KNEH---LLSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQKLDA 275
               ++EH   +++ KD     ++      G+ S KIEGR K   YV      YRQ +D 
Sbjct: 245 MPVFEDEHGTYIMNSKDLRAVQHVNQFTHMGIDSLKIEGRTKSHYYVARTAQVYRQAIDD 304

Query: 276 IMARRPEFVASSHGRTEHTFTPDPEKTFNRGSTDYF----VHERSQGIKDFRSPKYIGQD 331
            +A +P                + EK  +RG T+ F    VH+  Q  +   S +     
Sbjct: 305 AVAGKP---------FNMKLMDELEKLAHRGYTEGFYRRHVHDEYQNYETGNSIRDRQLF 355

Query: 332 VGKVVAIGKDFIQVSSTHEFNNGDGLAYFPPN----YAMAKQSDDKLQGLRVNRAEGHKL 387
           VG++    ++ I V   + F  G+ L    P+    + +      K Q + +    GH++
Sbjct: 356 VGEISDKSENTITVEVKNRFEVGNTLEIMTPHGNQYFQLNDMESTKGQSIDIAPGSGHRV 415

Query: 388 HVLQVP 393
            V+++P
Sbjct: 416 -VIRLP 420