Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 387 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  449 bits (1156), Expect = e-131
 Identities = 231/388 (59%), Positives = 280/388 (72%), Gaps = 4/388 (1%)

Query: 1   MLTTLAISNYRTLREIVLPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALALEG 60
           MLTTLAI NYR++  +VLPL +LN+VTGANGSGKSNLYKALRLLA+TAQGGVV ALA EG
Sbjct: 1   MLTTLAIGNYRSINHLVLPLSQLNLVTGANGSGKSNLYKALRLLAETAQGGVVEALAREG 60

Query: 61  GLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKP-DSTT 119
           GLDS +WAGPE   + M  G+ PI+       +RL+LGFA ED  + I LGLP P    +
Sbjct: 61  GLDSTWWAGPETSAR-MRRGEVPIQGQHPSEVRRLRLGFATEDLGFAITLGLPIPLPYPS 119

Query: 120 LFGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSSDSIFTEL 179
            F LDP+IK EAIW    YRP+S+LVER+  +V++R  +G  W  L  H  S +S F  +
Sbjct: 120 AFMLDPEIKCEAIWGAGAYRPSSLLVERKNALVRAR--EGNRWAVLDQHADSGESFFNIV 177

Query: 180 ADPERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLGTATPVLHHDGRDLPSAIQTIF 239
             P ++PE+  LR  I +WRFYDHFR D DAP R+PQLGT +PVLHHDGR+L SA+QTI 
Sbjct: 178 GRPRQAPEIGDLRAFINSWRFYDHFRIDRDAPCRQPQLGTRSPVLHHDGRNLASALQTII 237

Query: 240 EIGDKSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASELSDGTLRYLLLI 299
           EIGD    + A++DAFPG+++ I    GG+  +   Q GLLRPL  +ELSDGTLRYLLL+
Sbjct: 238 EIGDVEDLEEALNDAFPGSRLEINAPPGGLFSVRLHQHGLLRPLEGAELSDGTLRYLLLM 297

Query: 300 AALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWVVSHANRLINALNQFEE 359
           AALLTPRPP LMVLNEPETSLH DLLPALARLI +AS   Q+WVVSH+  LINAL   + 
Sbjct: 298 AALLTPRPPSLMVLNEPETSLHADLLPALARLIIRASRRSQVWVVSHSAPLINALAACDG 357

Query: 360 CNTLALDKTLGQTQILGQDLLNTPSWLW 387
           CN L L+K  GQTQ+ G  LL+ P W W
Sbjct: 358 CNVLELEKIQGQTQLRGVGLLDEPLWRW 385