Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 387 a.a., AAA family ATPase from Paraburkholderia sabiae LMG 24235

 Score =  456 bits (1173), Expect = e-133
 Identities = 229/390 (58%), Positives = 294/390 (75%), Gaps = 3/390 (0%)

Query: 1   MLTTLAISNYRTLREIVLPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALALEG 60
           MLTTLAI+NYR+LR++++PL RLNV+TG NGSGKS++Y+ALRLLA TA+GGV+ +LA EG
Sbjct: 1   MLTTLAIANYRSLRDLIVPLARLNVITGPNGSGKSSVYRALRLLAVTARGGVIPSLAREG 60

Query: 61  GLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKPDSTTL 120
           GL S  WAGPE  ++ MLAGD P++ T R  P  L+LGFAG++F Y I+LGLP P  T  
Sbjct: 61  GLQSTLWAGPERFSRAMLAGDAPVQGTRRTEPVNLRLGFAGDEFGYAIDLGLPIPGETQ- 119

Query: 121 FGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSSDSIFTELA 180
           FGLDP IKRE IW+G   RP+++LV+R+GP +++R  DG+ W T+   + S DS+ TE +
Sbjct: 120 FGLDPVIKRECIWSGPVLRPSALLVDRQGPSIRTRDDDGE-WQTIPHSVASFDSMMTEFS 178

Query: 181 DPERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLGTATPVLHHDGRDLPSAIQTIFE 240
           DP  +PE++ +R+ IR+WRFYDHFRTD ++P R PQ+GT TPVL  DG DL +A+QT+ E
Sbjct: 179 DPRSAPEMIAVREQIRSWRFYDHFRTDAESPVRLPQIGTHTPVLADDGADLAAALQTVRE 238

Query: 241 IGDKSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASELSDGTLRYLLLIA 300
           IGD +A D A+ DAFPG++V +T    G  ++  QQQGLLR L  +ELSDGTLRYLLL+A
Sbjct: 239 IGDPAALDAAIDDAFPGSRVIVT-NIEGRFEVTMQQQGLLRALKGAELSDGTLRYLLLVA 297

Query: 301 ALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWVVSHANRLINALNQFEEC 360
           ALLTPRPP L+VLNEPETSLHPDLLPALARLIA+AS   Q+ VVSHA RLI AL   E  
Sbjct: 298 ALLTPRPPALLVLNEPETSLHPDLLPALARLIARASLRSQVIVVSHAARLIAALEHEEGS 357

Query: 361 NTLALDKTLGQTQILGQDLLNTPSWLWQNR 390
            ++ L+K LG T+I   D  + P+W W  R
Sbjct: 358 ESVVLEKQLGATRIADADSRDLPAWKWPAR 387