Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 386 a.a., AAA family ATPase from Dickeya dadantii 3937

 Score =  113 bits (283), Expect = 8e-30
 Identities = 112/403 (27%), Positives = 177/403 (43%), Gaps = 53/403 (13%)

Query: 1   MLTTLAISNYRTLREIVLP--LGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALAL 58
           M+ ++ ++N+ +      P  L  LNV+ G NGSGKSNL +A+ LL + A   ++  +  
Sbjct: 1   MIKSIQLTNFLSFGASTQPIELKALNVIVGPNGSGKSNLLEAIELL-RNAPDKLITPIRD 59

Query: 59  EGGLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKPDST 118
            GG+    W G +      L        T  + P+ L+   +  + +   E+        
Sbjct: 60  GGGVSDWLWKGGQGKPTATLNA----VFTNPKGPQSLRYQLSFTEVAQRFEM-------- 107

Query: 119 TLFGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSSD---SI 175
               +D +I+ E   +G              P +  +++        +  L+  D   SI
Sbjct: 108 ----VDERIENEHPADGHPEPYFYYHFNNARPTLNVKNKKR------ALQLEDIDLEKSI 157

Query: 176 FTELADPERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLG---------TATP---V 223
             +  DP++ PE+  L   +   R Y  +      P R+PQ           T+T    V
Sbjct: 158 LAQRRDPDQYPEITYLAQELARIRLYREWSFGRYTPPRQPQKADLPNDHLESTSTNLGLV 217

Query: 224 LHHDGRDLPSAIQTIFEIGDKSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPL 283
           L+   RD P   Q + +         A+ D      V+I    GG +Q+ F +     P 
Sbjct: 218 LNRLRRD-PLVKQRLLKALQ------ALYDGIDDYDVQIE---GGTVQVFFHEGRFTIP- 266

Query: 284 YASELSDGTLRYLLLIAALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWV 343
            A+ LSDGTLRYL L+A L  P PP L+ L EPE  LHPD+LP L  L+ +AS   QL V
Sbjct: 267 -ATRLSDGTLRYLCLLAVLCHPNPPPLICLEEPELGLHPDVLPTLGALLKEASNRTQLIV 325

Query: 344 VSHANRLINALNQFEECNTLALDKTLGQTQILGQDLLNTPSWL 386
            +H++ L++A++   +   L  +KTL  T +   D  N   WL
Sbjct: 326 TTHSDVLVDAMSDQPDA-VLVAEKTLEGTTMTRLDAENLKPWL 367