Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 320 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  294 bits (752), Expect = 2e-84
 Identities = 152/315 (48%), Positives = 205/315 (65%)

Query: 1   MQLPPIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFK 60
           M  P  PDNE  RL  L+AL +LDT  EERFDR+TRL RR+F +PI +V+LVDA+RQWFK
Sbjct: 1   MLAPGKPDNEATRLKNLQALKLLDTAPEERFDRLTRLARRLFDVPIALVSLVDANRQWFK 60

Query: 61  SCQGLEVTETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTI 120
           S  GL+ +++ R+ISFCGHAI  D I  + DA+ D RF DNPLV   P IRFYAG PL +
Sbjct: 61  SNAGLDASQSPREISFCGHAILQDQILEICDAEQDERFSDNPLVVSEPGIRFYAGQPLGL 120

Query: 121 RGEYRVGTLCLIGNEPREFSADDIETLTDLGQMVEAELLSISLNTLDPLTMISNRRGFEQ 180
               ++GTLCLI   PR+   ++ + L DL +M E EL+++ + ++D LT++SNRRGF+ 
Sbjct: 121 EDGSKLGTLCLIDTRPRKLDGEERQLLRDLARMAEQELIAVQMASMDELTLLSNRRGFKT 180

Query: 181 LAFQSLASCRRTNSQAALVFFDLDFFKELNDSFGHRKGDQVLYDFAHLLMAAFRESDVIA 240
           LA  +L+ C R    A L+FFDL+ FK +ND FGH +GD  L  FA +L  AFRESDVI 
Sbjct: 181 LAQHALSVCDRLGRPATLLFFDLNEFKAVNDRFGHAEGDHALKTFADVLRIAFRESDVIG 240

Query: 241 RLGGDEFVVLLSFVKIDAVHVAIERFQSLLEQYNQQHPQQPTLVSSIGVAHWSPELDINL 300
           RLGGDEFV LL+      +   + R Q +L++ N    +   +  S+G   + P+   ++
Sbjct: 241 RLGGDEFVALLTGASHVEITSIMARLQEILDERNAMLQRGYDIRFSVGQIEYQPQRHGSI 300

Query: 301 EDLLDAADRAMYQDK 315
           + LL  AD AMY  K
Sbjct: 301 DTLLADADAAMYAHK 315