Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 540 a.a., Sensor histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  130 bits (326), Expect = 1e-34
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)

Query: 1   MQLPPIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFK 60
           MQ  P+P NE QRL+ L+ L +LDT  ++ FD I+ L + I   P+ ++TL+D  RQWFK
Sbjct: 1   MQTAPLPSNEEQRLARLRGLGVLDTLPQKAFDDISALAQVICGTPVALITLIDRDRQWFK 60

Query: 61  SCQGLEVTETSRDISFCGHAI-NHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLT 119
           S  G++V+ET R+++FC HAI + + + +V D   D RF  NPLVT   ++RFYAG P+ 
Sbjct: 61  SRVGVDVSETPREVAFCTHAILDPEHVMVVEDMSQDARFQCNPLVTGPTNVRFYAGAPIV 120

Query: 120 IRGEYRVGTLCLIGNEPREFSADDIETLTDLGQMV 154
               + +GT+C++    R   +  ++ L+ L  +V
Sbjct: 121 TSDGFALGTVCVVDQMARTLHSVQLDALSRLSALV 155