Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 353 a.a., diguanylate cyclase AdrA from Pectobacterium carotovorum WPP14

 Score =  104 bits (260), Expect = 3e-27
 Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 3/171 (1%)

Query: 146 TLTDLGQMVEAELLSISLNTLDPLTMISNRRGFEQLAFQSLASCRRTNSQAALVFFDLDF 205
           T T   ++ E + + + ++  D +T + NR  +E+L      SC+R    A LV FD+D 
Sbjct: 175 TYTTALKLAEHKRMLMEVSIHDGMTSLYNRHHWERLLKHEYDSCQRYKRTATLVLFDIDH 234

Query: 206 FKELNDSFGHRKGDQVLYDFAHLLMAAFRESDVIARLGGDEFVVLLSFVKIDAVHVAIER 265
           FK  ND+FGH  GDQ +   A  L + FRE+DVI R GGDEF V+L          A+ R
Sbjct: 235 FKAFNDNFGHNVGDQAILLLARELTSGFRETDVIGRFGGDEFAVILPQTSAGEALDAVNR 294

Query: 266 F-QSLLEQYNQQHPQQPTLVSSIGVAHWSPELDINLEDLLDAADRAMYQDK 315
             +SL  ++  Q PQ    V S+G+A  SPE+   + D L  AD A+Y+ K
Sbjct: 295 IRESLSLKFLNQTPQLAVFV-SVGIAEISPEMGQYI-DWLKTADMALYRAK 343