Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., PAS domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  125 bits (315), Expect = 2e-33
 Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 2/152 (1%)

Query: 9   NELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFKSCQGLEVT 68
           +E  RL  L +  +LDT  E  FD +  L  RI   P+   +LVD+ RQWFKS  GL V 
Sbjct: 12  DEADRLKALTSYGVLDTTPEGSFDDLASLAARICEAPMAAFSLVDSQRQWFKSEVGLGVR 71

Query: 69  ETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTIRGEYRVGT 128
           ET R +SFC HA+  D + ++ DA  D RF DN LVT +PHIRFYAGYPL       +G 
Sbjct: 72  ETPRPLSFCAHAMLGDDVMVIPDATQDDRFIDNDLVTDAPHIRFYAGYPLRTPDGVPLGA 131

Query: 129 LCLIGNEPREFSADDIE--TLTDLGQMVEAEL 158
           LC++ + PR     +++   L  L Q V  +L
Sbjct: 132 LCVLDDTPRPQGLTELQLMALKTLAQQVMTQL 163