Pairwise Alignments

Query, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 577 a.a., Cell volume regulation protein A from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  651 bits (1679), Expect = 0.0
 Identities = 337/575 (58%), Positives = 428/575 (74%), Gaps = 3/575 (0%)

Query: 1   MDADSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST 60
           +DA +I S F++G++L   S+LLS  SSRLGIPIL+IFLA+G+LAG DG GGI FD+Y  
Sbjct: 1   LDAATIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGIGGIPFDNYPF 60

Query: 61  AYLVSNFALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWL 120
           AY+VSN ALAIILLDGGMRT+ +SFRVAL PALSLAT GV IT+ +TG+MAAWLF L  +
Sbjct: 61  AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFHLDLI 120

Query: 121 QGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGSNDPMAVFLTVTLIAILANVG 180
           +GLL+GAIVGSTDAAAVFSLL G+ LNERVG+TLEIESGSNDPMAVFLT+TLI ++    
Sbjct: 121 EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIEMIQKHE 180

Query: 181 AELSASFMLISFIKQFGLGVLLGLGGGWLLWKLVNVSKLAEGLYSILVLSGGLMIYATSN 240
             L   F  +  I+QFGLG++ GLGGG+LL +++N   L  GLY +L LSGG++I+A + 
Sbjct: 181 TGLDWMFA-VHIIQQFGLGIVFGLGGGYLLQQMINRISLPSGLYPMLALSGGILIFALTT 239

Query: 241 KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIW 300
            L GSGIL++YL G  LGN+P R R+ IL   DG+ W++QI MFLVLGLL+TPSDL  I 
Sbjct: 240 ALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVTPSDLWPIA 299

Query: 301 LPGLALAFGMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMMAGLP 360
           +P L L+  MI FARPL+V+  LLPF+ F  R+R FISWVGLRGAVPIILAVFPMMAGL 
Sbjct: 300 VPALILSIWMIFFARPLSVFTGLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLE 359

Query: 361 GAQLYFNLAFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRSGVEIYPKSEWEVFVY 420
            A+L+FN+AFFVV+VSLL+QG SL+ AA+ AKV +PP   P+SR G++I+P + WE F+Y
Sbjct: 360 NARLFFNVAFFVVLVSLLLQGTSLSWAAKRAKVVVPPVGWPVSRVGLDIHPDNPWEQFIY 419

Query: 421 CLSESKWCIGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLEAL 480
            LS  KWC+G  L+ L MP+ TRIAA+FRNN L HP+GST L+ GD+LCV+G+E+ L AL
Sbjct: 420 QLSADKWCVGAALRDLHMPNETRIAALFRNNELFHPTGSTRLQEGDVLCVIGRERDLPAL 479

Query: 481 SNLFSQAPETDEVSRFFGDFFIDTEVKLADLAPIYGLTLDDE--TGAMTVADLVALELGA 538
             LFSQ+P      RFFGDF ++   K AD+A IYGL    E      T+ +++   LGA
Sbjct: 480 GKLFSQSPPVSLDQRFFGDFILEANAKFADVALIYGLEEGTEYRDKQQTLGEIIQQLLGA 539

Query: 539 HPVLGDQFLWQSLHWVVAGLYEGKVTNVGIRLPAD 573
            PV+GDQ  +  + W VA   +  V  +G+R+  D
Sbjct: 540 APVVGDQVEFGGMIWTVAEKEDNVVRKIGVRVAED 574