Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 24/165 (14%)

Query: 73  INQLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVTYDSDFDASINGDPKNFRLAYI 132
           I  L+ +G   + V +   K  +  ++ +A    +P+V YD   +A     P  F   YI
Sbjct: 71  IEGLMSKGAKALIV-LAMDKDAILPAVTKATRQKVPVVAYDRLIEA-----PGVF---YI 121

Query: 133 GTDNFELGKSLGEELKKLRPNGGMLIMQSGRPDSPNLNLRLMGVRSAL--SGKKYDIPPG 190
             DN E+G+    E+ K++P G  +I++ G P  PN +    G +  L  S KK DI   
Sbjct: 122 TFDNVEVGRMEAREVLKVKPKGNYVIIK-GSPSDPNADFLRAGQQEVLDASIKKGDI--- 177

Query: 191 KLLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIA 235
           K++ +E  +TE  +P         A K ME ++     K D+ +A
Sbjct: 178 KIVGDE--YTEGWKP-------EVAQKNMEQILTKNGNKVDAVVA 213