Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 4/143 (2%)

Query: 16  ISSVYGKELKLALVPKFYSV-FFDQSKNGCIDAAAQIEGVECIYRGPEISSVRLQDQVIN 74
           I++  GK+  +A V K   + +FD+ ++G ++      G +    GP  +    Q Q++ 
Sbjct: 35  ITTASGKKYTIATVVKVDGIAWFDRMRDG-VEQFKGDTGNDVWMVGPSQADAAAQVQLVE 93

Query: 75  QLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVTYDSDFDASINGDPKNF-RLAYIG 133
            LI +GVD IA+ V  S   VE  LK+A++ GI ++++++    +++ D + F   AY  
Sbjct: 94  NLIAQGVDAIAI-VPFSVEAVEPVLKKARDRGIVVISHEASNIQNVDFDIEAFDNKAYGA 152

Query: 134 TDNFELGKSLGEELKKLRPNGGM 156
               ELGKS+G + K +   G +
Sbjct: 153 NLMKELGKSMGGKGKYVATVGSL 175