Pairwise Alignments

Query, 127 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 127 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 73.2 bits (178), Expect = 1e-18
 Identities = 51/129 (39%), Positives = 60/129 (46%), Gaps = 10/129 (7%)

Query: 1   MNTLLTCLFIAMLLPYLAKGPVAWAMAKAGGY----DNHHPRSQQAQLTGFGARALAGHQ 56
           M   L C+ IA LLPYL  G     +AKAGG     DNH PR     L G   RA A   
Sbjct: 1   MTVALWCILIAFLLPYLCVG-----IAKAGGKYRLRDNHDPRDFLDSLEGAPRRAYAAQL 55

Query: 57  NAFESLLIFGLAVLTVIATGKVT-PTAEWLAIVHIVARFAYQILYLLNKGTLRSLSWFVA 115
           N+FE    F  AV+     G     T   LA++ I +R  Y I YL +   LRSL WFV 
Sbjct: 56  NSFEISPFFAAAVIVAHLAGNAELVTINVLAVLFITSRLLYIICYLADWAILRSLVWFVG 115

Query: 116 IFSAFGIFF 124
           +      FF
Sbjct: 116 VGLVASFFF 124