Pairwise Alignments

Query, 268 a.a., curli production assembly/transport component CsgG, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 282 a.a., curli secretion and assembly complex lipoprotein / curli secretion channel from Pseudomonas putida KT2440

 Score =  218 bits (554), Expect = 1e-61
 Identities = 124/255 (48%), Positives = 159/255 (62%), Gaps = 9/255 (3%)

Query: 7   IALMLLGMSACSLI-PKP-DLNITSAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFRDQTG 64
           + L  LG+  C L  P P + +  +  + P +     L N P PK  +   VY FRDQTG
Sbjct: 9   LILTALGLQGCGLREPMPAEQDSETPTLTPRASTYYDLINMPRPKGRLMAVVYGFRDQTG 68

Query: 65  QYKPQANVSSFSTAVTQGATSMLMQTLIDSKWFTPVEREGLQNLLTERKI--SNKQNGTK 122
           QYKP    SSFST+VTQGA SMLM  L  S WF  +EREGLQNLLTERKI  ++++    
Sbjct: 69  QYKPTP-ASSFSTSVTQGAASMLMDALSASGWFVVLEREGLQNLLTERKIIRASQKKPDV 127

Query: 123 GEDI----PVLSTARLLLEGGIISYETNTSTGGTGVEYYGIGASEMYREDLVTIYLRAVD 178
            E+I    P L  A L+LEGGII+Y+TN  +GG G  Y GI  S  YR D VT+ LRAVD
Sbjct: 128 AENIMGELPPLQAANLMLEGGIIAYDTNVRSGGEGARYLGIDISREYRVDQVTVNLRAVD 187

Query: 179 VHSGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVA 238
           V +G+V+ +V TSK + S    AG+F++    +L EAEVG+TTNEP Q CVL AIE AV 
Sbjct: 188 VRTGQVLANVMTSKTIYSVGRSAGVFKFIEFKKLLEAEVGYTTNEPAQLCVLSAIEAAVG 247

Query: 239 ELIEKGIKQGYWSAS 253
            L+ +GI++  W  +
Sbjct: 248 HLLAQGIERRLWQVA 262