Pairwise Alignments

Query, 532 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  508 bits (1309), Expect = e-148
 Identities = 267/549 (48%), Positives = 362/549 (65%), Gaps = 27/549 (4%)

Query: 7   SQLELGKYSSLIDLIERTSQRFGDKTAYACLGKNSSFNEIERDSRYFAAYLQNNTNLKPG 66
           S +++  Y+S++++ ER+ +RF D+ A++ LG   S+ E+ER S  FAA+LQ +T+LKPG
Sbjct: 16  STIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPG 75

Query: 67  DRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPT 126
           +RIA+Q+PN+ Q+ IA +GA+RAGLI+VNTNPLYTERE+ HQF DSGA+ALV L+     
Sbjct: 76  ERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGKR 135

Query: 127 LAKVVATTPIELVISTHPLDLIDP--------------QVQPKTGLKN-VEFCHVLQQGA 171
           + +V+  T IE +I     DL+                ++ P   L   V F  VL++G 
Sbjct: 136 VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAVPFKQVLREGR 195

Query: 172 LLPFTRFVPTLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGS-------VIS 224
            L        L D+A LQYTGGTTGL+KGAMLTHGN++AN  QV +           ++ 
Sbjct: 196 GLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLLK 255

Query: 225 EGEDIFVAPLPIYHIYAFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLN 284
           +G+++ +APLP+YHIYAF  N +     G  +VLI NPRDI G IK L K+ F+   GLN
Sbjct: 256 DGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGKWRFSALLGLN 315

Query: 285 TLFVALCHQPEFKALNFSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETSPVIS 344
           TLFVAL   P F+ L+FS LK+T SGGTAL  A A  W+  TG  I EGYGL+ETSPV S
Sbjct: 316 TLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGYGLTETSPVAS 375

Query: 345 LNAPGY-QKIGTIGKPVLGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQETAN 403
            N  G   ++GT+G PV GT  K++D+ GNE+  G  GEL  +GPQVM GYW  P+ TA 
Sbjct: 376 TNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAQ 435

Query: 404 VMTPDGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVV 463
            +  +G+FKTGDIA+++ +GF +IVDRKKDMIIVSGFNVYPNE+E+V+  HP +  CA +
Sbjct: 436 ALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCAAI 495

Query: 464 GVKDDHSGEAVKAFIVLKDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPKSTVG 523
           GV D+ SGEAVK F+V ++     +++K     +C+   T YK+PK I     LP + VG
Sbjct: 496 GVPDERSGEAVKLFVVPREGGLSVDELKA----YCKANFTGYKVPKHIVLRESLPMTPVG 551

Query: 524 KILRRELKN 532
           KILRREL++
Sbjct: 552 KILRRELRD 560