Pairwise Alignments

Query, 532 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 559 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  478 bits (1230), Expect = e-139
 Identities = 246/540 (45%), Positives = 354/540 (65%), Gaps = 21/540 (3%)

Query: 8   QLELGKYSSLIDLIERTSQRFGDKTAYACLGKNSSFNEIERDSRYFAAYLQNNTNLKPGD 67
           ++++  YSS++ L E + Q++G+  AY C+GK  SF+E++R S+ FA+YLQN   LK GD
Sbjct: 17  EVDVEAYSSVVGLFEESVQKYGEAVAYECMGKKISFHEVDRLSKDFASYLQNELKLKKGD 76

Query: 68  RIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTL 127
           RIAIQ+PN+ Q+ +A +GALRAGLI+VNTNPLYT  E+ HQF D+   A+V++++    L
Sbjct: 77  RIAIQMPNLLQYPVAMFGALRAGLIVVNTNPLYTPHEMEHQFKDADISAVVIVANFASNL 136

Query: 128 AKVVATTPIELVISTHPLDLID--------------PQVQPKTGLKN-VEFCHVLQQGAL 172
            +++    ++ +I T   D++                ++ P   L N V+F   L  G+ 
Sbjct: 137 EEILPRLDVKHIILTEIGDMLGGLKGGIVNLVVKYIKKMVPAYNLPNAVKFNDALDIGSH 196

Query: 173 LPFTRFVPTLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGEDIFVA 232
           L        L+D A LQYTGGTTG+SKGA LTHGN++AN  Q+ + +   + EGE++ + 
Sbjct: 197 LDLQPVTLDLNDTAYLQYTGGTTGVSKGAALTHGNIIANMQQISAWMRPKLKEGEELVIT 256

Query: 233 PLPIYHIYAFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLNTLFVALCH 292
            LP+YHI+A  VN +   + G  ++LI NPRD+    K L K+ F+   G+NTLF  L +
Sbjct: 257 ALPMYHIFALTVNCLAMLKIGAHNLLITNPRDMKAFCKDLRKHKFSVITGVNTLFNGLLN 316

Query: 293 QPEFKALNFSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETSPVISLN-APGYQ 351
           Q  F+ L+FS+LKI++ GG A+    A  W   TG  ++EGYGL+ETSPV   N   G +
Sbjct: 317 QESFRNLDFSYLKISVGGGMAVQKYVAEKWNAVTGTPLAEGYGLTETSPVACCNPIDGTE 376

Query: 352 KIGTIGKPVLGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQETANVMTPDGFF 411
           +IGTIG P+  TEVK++D+ GNE+  G  GEL  +GPQVM GYWN P+ET +VM  + + 
Sbjct: 377 RIGTIGLPLPNTEVKIIDDEGNELPNGEKGELCIKGPQVMKGYWNKPKETNDVMLGE-WL 435

Query: 412 KTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDDHSG 471
           KTGDI I+  +GF +IVDRKK+MI+VSGFNVYPNEVE+ +A+H  ++E  V+G+ D+HS 
Sbjct: 436 KTGDIGIITNDGFIKIVDRKKEMILVSGFNVYPNEVEDAIATHDKVMEVGVIGMPDEHST 495

Query: 472 EAVKAFIVLKDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPKSTVGKILRRELK 531
           E V A++V  D S       + I+  CRE LT YK+P+++ F+ +LPKS VGKILRR +K
Sbjct: 496 EKVIAYVVANDPS----VTASEIIKHCRESLTNYKVPREVYFVDELPKSNVGKILRRIIK 551