Pairwise Alignments

Query, 218 a.a., uracil-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., uracil-DNA glycosylase from Dickeya dianthicola 67-19

 Score =  293 bits (749), Expect = 2e-84
 Identities = 130/216 (60%), Positives = 164/216 (75%)

Query: 1   MTWPAFIDHQRTQPYYQQLIAFVNQERQVGKVIYPPKEDVFNAFKTTPLEQVRVVLIGQD 60
           +TW   +  ++  PY+   ++FV+QER  GKVIYPP++DVFNAF+ T    V VV++GQD
Sbjct: 5   LTWHDVLAQEKELPYFVNTLSFVHQERTAGKVIYPPQKDVFNAFRFTEFHAVNVVILGQD 64

Query: 61  PYHGPDQAHGLCFSVKRGVKAPPSLANMYKELVNDIPGFHIPNHGDLTQWAEQGILMLNT 120
           PYHGP+QAHGL FSV+ GV APPSL N+YKEL NDIPGF IP+HG L  WA+QG+++LNT
Sbjct: 65  PYHGPNQAHGLSFSVRPGVPAPPSLVNIYKELANDIPGFDIPSHGFLQSWAQQGVMLLNT 124

Query: 121 VLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHQILS 180
           VLTVE G+AHSHAN GWE FT + ++ LNA    I+F+LWGSHA +KG++I   +H +L 
Sbjct: 125 VLTVEAGKAHSHANLGWETFTDKVIEKLNAHREGIVFLLWGSHAQRKGSIIDTQRHHVLK 184

Query: 181 GPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQW 216
            PHPSPLSA+RGF GC HFSK NQLL  +G  PI W
Sbjct: 185 APHPSPLSAHRGFLGCHHFSKTNQLLEQQGNTPIDW 220