Pairwise Alignments

Query, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., putative phosphoglycerate dehydrogenase from Agrobacterium fabrum C58

 Score =  142 bits (358), Expect = 1e-38
 Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 11/268 (4%)

Query: 37  EIIPRAQDAEIVFTNKTPLDAKTLAQLPKLKYVGVLATGTNVVDIAAAKDLGIVVTNVPA 96
           E+  R  D + V       + +     P+LK +     G + +DI AA   GI VTN P 
Sbjct: 43  ELSARLGDVDAVIAGVDTWNERVFNLAPRLKAIARFGVGVDNIDIDAAHRHGIAVTNAPG 102

Query: 97  YGHDAVAQMVFAHILHHTQAVAAHHQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYG 156
              +AVA++    IL   + +   H A+  G W             Q L G+ +GL+G+G
Sbjct: 103 GNANAVAELTLGLILSAMRRIPYLHDALRGGAWDRFVG--------QELIGRRVGLLGFG 154

Query: 157 DIGQQVAKLALAFGMKVLVNTR--TEPAHLPQGVSWTSRDKVLKESDILSLHCPLTPETN 214
           +I +++A+    F ++V+   +   + A    GV     D+VL  SDIL +  P  PET 
Sbjct: 155 NIARKIARKLCGFDVEVIAYDKFPDQVAATKLGVRMCEMDEVLSSSDILVMMMPSLPETR 214

Query: 215 ELINAQTLELMKPQALLINTARGGLIDEAALAVALTQGRV-FAGVDVLSTEPPSMDNPLL 273
            L++A     MKP ++ INTARG L+DE AL  AL  G +  A +DV  TEP   DNPL 
Sbjct: 215 RLMDAGRFARMKPGSIFINTARGALVDEKALYDALVSGHLQAAAIDVYETEPALPDNPLF 274

Query: 274 SAPNISTSPHNAWATKEARQNLLNIATE 301
           + P I T+PH A  T E   ++  I  E
Sbjct: 275 TLPQIVTTPHTAAETYETYTSIGRITAE 302