Pairwise Alignments

Query, 378 a.a., secretion protein, HlyD family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  330 bits (846), Expect = 4e-95
 Identities = 169/368 (45%), Positives = 243/368 (66%), Gaps = 2/368 (0%)

Query: 9   LCIVIFKVFKIPMNKWTVPTAVLGGVFLIGALLLIMNYNHPYSRFAREYYVTIPITPAVK 68
           L   +FK+F+IP+N+WT+ TA LGGVFL+  L+L+MNYNHPY+  A++  + IPITP V 
Sbjct: 12  LAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVT 71

Query: 69  GLVISVDVKPNTFIKQGDVLFRIDPTPYQAVVKTKKAALLAAEQEVPQLKAAWESAKANV 128
           G+V  V  K N  I++G+VLF++DP  YQA V   +A L+ A   +  L+A    A+AN 
Sbjct: 72  GIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANT 131

Query: 129 ARVAADRERNKSAYDRYEQGHRKGGANSPFTALELDNKRQLYLASDAQLTAVQAEELRAR 188
            +V+A+R+R    Y RY +G +   A +PF+  ++D+ RQ +LA DA +    AE+ + +
Sbjct: 132 TQVSAERDRLFKNYQRYLKGSQ--AAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQ 189

Query: 189 LAYESNVDGVNSKVAGLQGDLENALYNLEQTVVRAPADGIVTQMALRPGAMAVPLPLRPV 248
              +S V+G  S++  L+  L  A YNLEQTV+RAP++G VTQ+ +RPG  A  LPLRPV
Sbjct: 190 SQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPV 249

Query: 249 MNFIPDEQRYFAGAFWQNSLLRLQEGDEAEVVLDAVPGKVFKGKVAKVLPAMAEGEIQMN 308
           M FIP+++R     F QNSLLRL+ GD+AEVV +A+PG+VF GK+  +LP +  G  Q  
Sbjct: 250 MVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQ 309

Query: 309 GTLQSSNQLFQTGRVIVLIDIEDDAIRREFPAGVAGQVAVYTEHFHHVAVMRKVLLRMQG 368
           G LQS   +  T  V+  I+++ +      P G+  QVAVY++HF HV+VMRKVLLRM  
Sbjct: 310 GVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTS 369

Query: 369 WLNYLFFD 376
           W++YL+ D
Sbjct: 370 WMHYLYLD 377