Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  288 bits (736), Expect = 2e-82
 Identities = 153/327 (46%), Positives = 208/327 (63%), Gaps = 7/327 (2%)

Query: 8   ALLGTLLLGASLNVAAADQTLLNSSYDISRELFNAYNPVFAKHW-QEKTGKTVEIKQSHA 66
           AL   +  G+++   A D  LLN SYD +REL+  YN  F + W Q   G  V+I+QSH 
Sbjct: 11  ALASAVFAGSAV---AKDYELLNVSYDPTRELYQDYNAEFTQFWKQSHPGDNVKIQQSHG 67

Query: 67  GSSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVR 126
           GS  Q R+++ GL ADVVT     D+  +   GK +PENWQ  LP+AS+PY STI FLVR
Sbjct: 68  GSGKQGRAVIDGLRADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTSTIVFLVR 127

Query: 127 KGNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKK 186
           KGNPK I DWGDL K DV ++ PNPKTSG AR+ +LAA  +  K  G  +EA    ++K+
Sbjct: 128 KGNPKGIKDWGDLIKKDVSVITPNPKTSGGARWNFLAAWAYGLKTGG--SEAKAQEYVKE 185

Query: 187 FLGNVAVFDTGGRGATTSFVERGIGDVLITFESEV-NNIRQQYGADGYQVVVPKTSILAE 245
              +V V DTG RG+T +FV  G GDVL+ +E+E    +++  GAD + +VVP  SILAE
Sbjct: 186 LFKHVPVLDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGADKFDIVVPSLSILAE 245

Query: 246 FPVAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVEL 305
            PVAVV+KNA++ G  E+ATEYL +LYS   Q + A   YR  + KV A++ +QFP ++L
Sbjct: 246 PPVAVVDKNAEKKGNTEIATEYLKHLYSPAGQEIAAKNFYRPRDAKVAAKYAQQFPKLDL 305

Query: 306 MTVEQIIGNWDNAMKTQFANGAKLDQL 332
           +T+++  G W  A    F +G   DQ+
Sbjct: 306 VTIDKDFGGWKTAQPKFFNDGGVFDQI 332