Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 342 a.a., sulfate ABC transporter from Pseudomonas putida KT2440

 Score =  295 bits (756), Expect = 9e-85
 Identities = 156/327 (47%), Positives = 214/327 (65%), Gaps = 7/327 (2%)

Query: 8   ALLGTLLLGASLNVAAADQTLLNSSYDISRELFNAYNPVFAKHWQEK-TGKTVEIKQSHA 66
           AL   +  G+++   A D  LLN SYD +REL+  YN  F KHWQ+   G  V+I+QSH 
Sbjct: 17  ALASAVFAGSAI---AKDYELLNVSYDPTRELYQQYNAEFIKHWQQAHPGDKVKIQQSHG 73

Query: 67  GSSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVR 126
           GS  QAR+++ GL ADVVT     D+  +   GK +PENWQ  LP+AS+PY STI FLVR
Sbjct: 74  GSGKQARAVIDGLRADVVTLALAGDIDEVAKLGKTLPENWQTRLPDASTPYTSTIVFLVR 133

Query: 127 KGNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKK 186
           KGNPK I DWGDL K DV ++ PNPKTSG AR+ +LAA  +  K  G + +A   A++++
Sbjct: 134 KGNPKGIKDWGDLIKKDVSVITPNPKTSGGARWNFLAAWAYGLKVGGSEEKAK--AYVQE 191

Query: 187 FLGNVAVFDTGGRGATTSFVERGIGDVLITFESEV-NNIRQQYGADGYQVVVPKTSILAE 245
              +V V DTG RG+T +FV  G GDVL+ +E+E    +++  GA+ +++VVP  SILAE
Sbjct: 192 LFKHVPVLDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGANKFEIVVPSLSILAE 251

Query: 246 FPVAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVEL 305
            PVAVV+KNA++ G  E+A EYL +LYS   Q++ A   YR  +EKV A+F KQFP ++L
Sbjct: 252 PPVAVVDKNAEKKGNTEIAIEYLKHLYSPAGQKIAAENFYRPRDEKVAAQFGKQFPKLDL 311

Query: 306 MTVEQIIGNWDNAMKTQFANGAKLDQL 332
           +T+++  G W  A    F +G   DQ+
Sbjct: 312 VTIDKDFGGWKTAQPKFFNDGGVFDQI 338