Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 329 a.a., Sulfate-binding protein Sbp from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  295 bits (754), Expect = 1e-84
 Identities = 152/326 (46%), Positives = 209/326 (64%), Gaps = 2/326 (0%)

Query: 10  LGTLLLGASLNVAAADQTLLNSSYDISRELFNAYNPVFAKHWQEKTGKTVEIKQSHAGSS 69
           +G  LL AS ++ A D  LLN SYD +REL+  YN  F+ HW+++TG  V I+QSH GS 
Sbjct: 6   VGFTLLLASTSILAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIRQSHGGSG 65

Query: 70  AQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVRKGN 129
            QA S++ G+ ADVVT     DV  + +RG+ I +NW + LP+ S+PY STI FLVRKGN
Sbjct: 66  KQATSVINGIEADVVTLALAYDVDAIAERGR-IDKNWIKRLPDNSAPYTSTIVFLVRKGN 124

Query: 130 PKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKKFLG 189
           PKQI DW DL K  V ++ PNPK+SG AR+ YLAA G+A  ++  +++A    F+K    
Sbjct: 125 PKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYAL-HHNNNDQAKAQDFVKALFK 183

Query: 190 NVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVVPKTSILAEFPVA 249
           NV V D+G RG+T +FVERGIGDVLI +E+E      + G D +++V P  SILAE  V+
Sbjct: 184 NVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVS 243

Query: 250 VVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVELMTVE 309
           VV+K  ++  T+ +A  YL YLYS E Q + A   YR  +  V  ++   FP ++L T++
Sbjct: 244 VVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTID 303

Query: 310 QIIGNWDNAMKTQFANGAKLDQLLKR 335
           ++ G W  A K  FANG   DQ+ KR
Sbjct: 304 EVFGGWAKAQKDHFANGGTFDQISKR 329