Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., Sulfate and thiosulfate binding protein CysP from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  390 bits (1001), Expect = e-113
 Identities = 198/324 (61%), Positives = 246/324 (75%), Gaps = 4/324 (1%)

Query: 13  LLLGASLNVAAADQT--LLNSSYDISRELFNAYNPVFAKHW-QEKTGKTVEIKQSHAGSS 69
           L L A L +A   Q   LLNSSYD+SRELF A NP F + W ++  G  + IKQSHAGSS
Sbjct: 11  LTLAAMLLLAGQAQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSS 70

Query: 70  AQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVRKGN 129
            QA +ILQGL ADVVT+NQVTDVQILHD+GKLIP +WQ  LPN SSP+YST+ FLVRKGN
Sbjct: 71  KQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGN 130

Query: 130 PKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKKFLG 189
           PK I DW DL + DVKL+FPNPKTSGNARYTYLAA G A    G D +A  + F+ +FL 
Sbjct: 131 PKNIHDWSDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADNADGGD-KAKTEQFMTQFLK 189

Query: 190 NVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVVPKTSILAEFPVA 249
           NV VFDTGGRGATT+F ERG+GDVLI+FESEVNNIR+QY A G++VV+PKT+ILAEFPVA
Sbjct: 190 NVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVA 249

Query: 250 VVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVELMTVE 309
            V+KN + NGT++ A  YL++LYS ++Q ++  + YRV+N +++ +   +FP  EL  VE
Sbjct: 250 WVDKNVQANGTEKAAKAYLNWLYSPQAQTIITHYYYRVNNPEIMGKQADKFPQTELFRVE 309

Query: 310 QIIGNWDNAMKTQFANGAKLDQLL 333
           +  G+W   MKT FA+G +LD+LL
Sbjct: 310 EKFGSWPEVMKTHFASGGELDKLL 333