Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., thiosulfate-binding protein from Escherichia coli BL21

 Score =  392 bits (1006), Expect = e-114
 Identities = 204/336 (60%), Positives = 251/336 (74%), Gaps = 6/336 (1%)

Query: 1   MPVKLTKALLGTLLLGASLNVAAADQT--LLNSSYDISRELFNAYNPVFAKHW-QEKTGK 57
           M V L K    +L L ASL +A   Q   LLNSSYD+SRELF A NP F + W ++  G 
Sbjct: 1   MAVNLLKK--NSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGD 58

Query: 58  TVEIKQSHAGSSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPY 117
            + IKQSHAGSS QA +ILQGL ADVVT+NQVTDVQILHD+GKLIP +WQ  LPN SSP+
Sbjct: 59  KLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPF 118

Query: 118 YSTIAFLVRKGNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNE 177
           YST+ FLVRKGNPK I DW DL + DVKL+FPNPKTSGNARYTYLAA G A K  G D +
Sbjct: 119 YSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGD-K 177

Query: 178 ASLDAFLKKFLGNVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVV 237
           A  + F+ +FL NV VFDTGGRGATT+F ERG+GDVLI+FESEVNNIR+QY A G++VV+
Sbjct: 178 AKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVI 237

Query: 238 PKTSILAEFPVAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFT 297
           PKT+ILAEFPVA V+KN + NGT++ A  YL++LYS ++Q ++  + YRV+N +V+ +  
Sbjct: 238 PKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLK 297

Query: 298 KQFPTVELMTVEQIIGNWDNAMKTQFANGAKLDQLL 333
            +FP  EL  VE   G+W   MKT F +G +LD+LL
Sbjct: 298 NKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLL 333