Pairwise Alignments

Query, 237 a.a., transcriptional regulatory protein RstA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 243 a.a., Two-component system response regulator OmpR from Variovorax sp. SCN45

 Score =  161 bits (408), Expect = 9e-45
 Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 6/236 (2%)

Query: 4   PQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPG 63
           P    ++++V+DD R+ +L+  YL   G  V V   G  +   L+    D+I+LD+M+PG
Sbjct: 5   PARTDKIVIVDDDARIRDLLRRYLTQEGFEVIVAEDGKALNRILLRDTVDLIVLDLMMPG 64

Query: 64  IDGLSLCEKL-PDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLL 122
            DGLS+C  L       PI++++A G   D+I GLE+GADDY+ KP +P  L+AR++ +L
Sbjct: 65  EDGLSVCRLLRAANDRTPIIMLTAKGEDVDRIVGLEVGADDYLGKPFNPRELLARVHAVL 124

Query: 123 RRQNQ-----PPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQV 177
           RR+        P  E+  +TFG  + D  +  ++ D +E+ LT+ EF +L  L     Q 
Sbjct: 125 RRRPPLEAPGAPSTENETVTFGPFAFDLGSRTLKKDGEELSLTTGEFAMLKALVRHPRQP 184

Query: 178 LSRQYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPE 233
           LSR+ + QL    +F+  DR +DV+ISRLRK +  +   P  I+TVWG GY+F P+
Sbjct: 185 LSREKLAQLARGREFEPFDRSLDVQISRLRKLVESDAAAPRYIQTVWGVGYVFVPD 240