Pairwise Alignments

Query, 237 a.a., transcriptional regulatory protein RstA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  214 bits (545), Expect = 1e-60
 Identities = 109/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%)

Query: 9   RVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGIDGLS 68
           R+L+VEDD RLA L  +YL+++G  V VE  G     R+I+ +PD+++LD+MLPG DGLS
Sbjct: 7   RILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGLS 66

Query: 69  LCEKLPDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQNQP 128
           +C ++   + GPIL+++A     DQ++GL+LGADDYV KPV P LL+ARI  LLRR ++ 
Sbjct: 67  ICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRR-SET 125

Query: 129 PQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQVLSRQYIYQLLL 188
             ++   L FG L ID      RL  + ++LT  EF+LLWLLAS AG+VL+R+ I+  L 
Sbjct: 126 VDSKRQDLAFGALRIDNRLREARLGEQLIELTGAEFDLLWLLASNAGRVLTREQIFTALR 185

Query: 189 NIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEA 234
            + +DG+DR ID+RIS++R K+ D+   P  IKT+  +GYLF  EA
Sbjct: 186 GVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLFVGEA 231