Pairwise Alignments

Query, 237 a.a., transcriptional regulatory protein RstA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 239 a.a., two-component system response regulator OmpR from Pectobacterium carotovorum WPP14

 Score =  153 bits (387), Expect = 3e-42
 Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 5/234 (2%)

Query: 5   QSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGI 64
           Q  +++L+V+DD+RL  L+  YL   G  V      + +   L      +++LD+MLPG 
Sbjct: 2   QENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGE 61

Query: 65  DGLSLCEKLPDYFAG-PILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLR 123
           DGLS+C +L       PI++++A G   D+I GLE+GADDY+ KP +P  L+ARI  +LR
Sbjct: 62  DGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLR 121

Query: 124 RQNQP----PQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQVLS 179
           RQ       P  E   + FGK  ++  T  +  D++ + LTS EF +L  L S   + LS
Sbjct: 122 RQANELPGAPSQEEAIIAFGKFKLNLGTREMFRDDEPMPLTSGEFAVLKALVSHPREPLS 181

Query: 180 RQYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPE 233
           R  +  L    ++   +R IDV+ISRLR+ + ++   P  I+TVWG GY+F P+
Sbjct: 182 RDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPD 235