Pairwise Alignments

Query, 257 a.a., conserved hypothetical protein TIGR00726 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 244 a.a., Multicopper polyphenol oxidase from Pseudomonas sp. S08-1

 Score =  225 bits (574), Expect = 6e-64
 Identities = 119/256 (46%), Positives = 157/256 (61%), Gaps = 23/256 (8%)

Query: 2   LMHDWPVPDNVAIAMTDRHGGVSLAPYDSLNLGLHVGDIPQQVLVNRGILAKQLGLATEP 61
           L+ DWP P NV   +T R GG SL+P+DSLNLG HV D PQ V  NR +L ++L    +P
Sbjct: 8   LLPDWPAPANVRACVTTRAGGTSLSPFDSLNLGDHVEDDPQAVADNRRLLVERLDC--QP 65

Query: 62  VWLEQVHGTHVIDLADIKSVDLAPEAQAQQASISVSHPHIADASYTNLAGRVCVVMTADC 121
            WL QVH   V++   +                   H  +ADAS++   G  C V+TADC
Sbjct: 66  AWLRQVHSPDVVEADPV-------------------HVPVADASWSATPGIACAVLTADC 106

Query: 122 LPVLLCNQQGTEVAAAHAGWRGLCDGVIEASVAHFTSKPNELIAYLGPAIGPMAFEVGAE 181
           LP L C++ GT VAAAHAGWRGL  GV+E ++     +P E++ +LGPAIGP AFEVG E
Sbjct: 107 LPALFCDRAGTRVAAAHAGWRGLAGGVLENTLEALAVEPAEVLVWLGPAIGPQAFEVGPE 166

Query: 182 VRDAFMVKDPNAESCFIARGD--KYLADIIGLAKLRLTKLGVSQVYSADICTVSNMDYFS 239
           VR+AF+ +   AE  F +  +  KY+ADI  +A++RL   GV+ VY   +CTV +  +FS
Sbjct: 167 VREAFVSQHAEAERAFGSSRNPGKYMADIYAMARIRLAARGVTAVYGGGLCTVGDERFFS 226

Query: 240 YRRDKITGRMASLIWL 255
           YRR   TGR ASL+WL
Sbjct: 227 YRRAARTGRFASLVWL 242