Pairwise Alignments

Query, 346 a.a., ISSod13, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 379 a.a., IS481 family transposase from Paraburkholderia sabiae LMG 24235

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 45/307 (14%)

Query: 19  AEELSNVSRACKVMGVSRDTFYRYRELVDDGGVDALIEKSRRSPNLKNRVEEAVEQAVME 78
           A +  + S  C+   +SR T Y++ +     G   L ++SRR  +   R  E +E  V+E
Sbjct: 20  ATQALSFSELCRRYRISRQTGYKWLDRHKAEGPGGLADRSRRPHHSPLRSPEHIEARVLE 79

Query: 79  YAIEFPAHGQHRTSNELRKKG--VFVSGSGVRSIWLRHDLENFKKRLKALEAKVARDGIQ 136
              E    G  +    LR  G     + + +  I  RH                      
Sbjct: 80  LRREH-GWGGRKIERRLRDLGETEVPAPATITEILRRHG--------------------- 117

Query: 137 LTDEQIAALERKKHDDEACGEIETAHPGYLGSQDTFYVGNLKGV--GRIYQQTYVDTYCK 194
           L DEQ  A ++++H        E AHP  L   D  + G+++ +  GR    T +D + +
Sbjct: 118 LIDEQ--ASQQRQH----WQRFEHAHPNLLWQMD--FKGDVQTLKDGRCMPLTVIDDHSR 169

Query: 195 VAHCKLYTTKTPITAADLLNDKVLPFYESQQLPVLRILTDRGTEY---CGKVEHHDYQLY 251
                L  +    T   ++  ++   +    LP  RI TD G  +       +  +  ++
Sbjct: 170 Y---NLVLSACSRTTTQVVQAELERAFRCYGLPA-RINTDNGAPWGSPGAPGQLTELAVW 225

Query: 252 LAINDIDHTKTKAMSPQTNGICERFHKTILNEFYQVTFRKKLYQTLEELQKDLDEWLSYY 311
           L    I+ + ++   PQTNG  ERFH+T+  E       ++ + T   +Q+ LD W   Y
Sbjct: 226 LIRLGIEVSYSRPYHPQTNGKDERFHRTLKAE----VLDRQTFSTHAHMQQALDRWRHVY 281

Query: 312 NNERTHQ 318
           N ER H+
Sbjct: 282 NVERPHE 288