Pairwise Alignments

Query, 257 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 258 a.a., peroxide stress protein YaaA from Escherichia coli ECOR38

 Score =  294 bits (753), Expect = 1e-84
 Identities = 137/257 (53%), Positives = 195/257 (75%)

Query: 1   MLILVSPAKTLDFEQPPLTQIHTRPDFLAQSQELIQVCQQLTPSDIATLMKVSDSIAGLN 60
           MLIL+SPAKTLD++ P  T  +T P+ L  SQ+LI   ++LTP  I++LM++SD +AG+N
Sbjct: 1   MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISSLMRISDKLAGIN 60

Query: 61  AARFGEWKPDYSIDNAKQAIFAFRGDVYTGFDADTLTAAQLERTQSQLRILSGLYGLLRP 120
           AARF +W+PD++ +NA+QAI AF+GDVYTG  A+T +    +  Q  LR+LSGLYG+LRP
Sbjct: 61  AARFHDWQPDFTPENARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRP 120

Query: 121 LDLILPYRLEMGTALTNQKGKNLYEFWGNTLTDAVNSAVAAQGDGIIINLASNEYFKAIK 180
           LDL+ PYRLEMG  L N +GK+LY+FWG+ +T+ +N A+AAQGD ++INLAS+EYFK++K
Sbjct: 121 LDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVK 180

Query: 181 PKFLNGQLITPVFKDFKNGQYKVISFFAKRARGMMARYIIDQQVSSIDGLKAFEVDGYYY 240
           PK LN ++I PVF D KNG++K+ISF+AK+ARG+M+R+II+ +++  + L  F  +GY++
Sbjct: 181 PKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFF 240

Query: 241 SEELSKPNEPTFLREAQ 257
            E  S   E  F R  Q
Sbjct: 241 DEASSSNGELVFKRYEQ 257