Pairwise Alignments

Query, 311 a.a., riboflavin biosynthesis protein RibF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  333 bits (853), Expect = 4e-96
 Identities = 172/308 (55%), Positives = 219/308 (71%), Gaps = 1/308 (0%)

Query: 1   MELIRGIHNILSS-HHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQPQ 59
           M+LIRGIHN+  +   GCVLTIGNFDGVHRGH  ++  L ++ ++ +LP  VM FEPQP 
Sbjct: 1   MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPL 60

Query: 60  ELFRGENAPARLSLLRDKIVLLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGIKY 119
           ELF  + APARL+ LR+K+  L E GV+ ++CV F+R FA   A++FI +LLV+ L +K+
Sbjct: 61  ELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKF 120

Query: 120 LVVGDDFCFGKGRKGDFDMLKQAGTRYGFTVVSTQSFIVGSQRVSSTAVREQLAKGNLEQ 179
           L VGDDF FG GR+GDF +L++AG  YGF + STQ+F  G  R+SSTAVR+ LA  NL  
Sbjct: 121 LAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLAL 180

Query: 180 ARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWEDSDIYEGV 239
           A  LLGHPF +SGRV HG ++GRTIGFPTAN+ L+R V PV+GV+AV++         GV
Sbjct: 181 AESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGV 240

Query: 240 ANIGFRPTVNGQICQLEVHLLDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILNDA 299
           ANIG RPTV G   QLEVHLLD   D+YG+H++V L  K+R+EQ F SLD LK QI  D 
Sbjct: 241 ANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDE 300

Query: 300 NEARALFG 307
             AR  FG
Sbjct: 301 LTAREFFG 308