Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 938 a.a., isoleucine--tRNA ligase from Serratia liquefaciens MT49

 Score = 1367 bits (3538), Expect = 0.0
 Identities = 660/942 (70%), Positives = 766/942 (81%), Gaps = 6/942 (0%)

Query: 1   MSDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYA 60
           MSDYK TLNLPET FPMRG+LA REP ML+RW +  LY  IR ++ G+  FILHDGPPYA
Sbjct: 1   MSDYKNTLNLPETGFPMRGDLAKREPGMLQRWYEQDLYGIIRTAKKGKKSFILHDGPPYA 60

Query: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120
           NGSIHIGHSVNKILKDII+KSK MSGFD+PYVPGWDCHGLPIELKVEQ  GKPG+K++AA
Sbjct: 61  NGSIHIGHSVNKILKDIIIKSKGMSGFDSPYVPGWDCHGLPIELKVEQLYGKPGEKLTAA 120

Query: 121 EFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHK 180
           EFR +CR+YAAEQV+GQ++DFIRLGVLGDW +PYLTMDF TEANI+R+L K+I+NGHL K
Sbjct: 121 EFRVKCREYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANIIRALGKIIDNGHLLK 180

Query: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIW 240
           G KPVHWCTDC S+LAEAEVEY DKTSP+IDVAF AVD+ AVA KFGV+ +S  VS+VIW
Sbjct: 181 GAKPVHWCTDCRSSLAEAEVEYYDKTSPSIDVAFHAVDAAAVAAKFGVTSFSGPVSLVIW 240

Query: 241 TTTPWTLPANRALSISPELDYSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKI 300
           TTTPWTLPANRA+S+ PE  Y LV+   +G    +ILA  LVE+ M R G  S +VL   
Sbjct: 241 TTTPWTLPANRAISLHPEFAYQLVQV--EG--QCLILAAELVESVMKRAGISSWTVLGSC 296

Query: 301 KGAALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP 360
           KGA LEL+RF+HPF+ FDVPAI+G+HVT DAGTG VHTA GHG DDFV+ QKYGLE+ANP
Sbjct: 297 KGADLELMRFEHPFMGFDVPAIMGEHVTLDAGTGAVHTAGGHGPDDFVISQKYGLEIANP 356

Query: 361 VGDNGVYKPDTE-FFAGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFR 419
           VG NG Y   T     G+ VFKAND +V LL+EKGALLH     HSYP CWRHKTPIIFR
Sbjct: 357 VGPNGCYLTGTHPLLDGKFVFKANDLIVDLLREKGALLHVEKLVHSYPCCWRHKTPIIFR 416

Query: 420 ATPQWFISMDNHNLRKQALSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITL 479
           ATPQWFISMD   LR+Q+L EI+ +QWIP+WGQ+RIE MV NRPDWCISRQRTWGVP++L
Sbjct: 417 ATPQWFISMDQKGLRQQSLEEIKGVQWIPEWGQARIETMVANRPDWCISRQRTWGVPMSL 476

Query: 480 FVHRETEELHPDSVSLMARVANRIEQEGIQAWWDLDAAELLGEEAEQYRKVTDTLDVWYD 539
           FVH++TE+LHP SV LM  VA R+EQ+GIQAWWDLDAA++LG +A  Y KV DTLDVW+D
Sbjct: 477 FVHKDTEQLHPRSVELMEEVAKRVEQDGIQAWWDLDAADILGADAADYVKVPDTLDVWFD 536

Query: 540 SGSTFASVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTV 599
           SGST +SVV  RPEF GHG D+YLEGSDQHRGWFMSSLMISTAM GKAPYK+VLTHGFTV
Sbjct: 537 SGSTHSSVVDVRPEFQGHGADMYLEGSDQHRGWFMSSLMISTAMKGKAPYKEVLTHGFTV 596

Query: 600 DGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIR 659
           DG+GRKMSKSIGN ++PQ V NKLG DILRLWVA+TDY+GE+ VSDEIL RSAD+YRRIR
Sbjct: 597 DGQGRKMSKSIGNTVSPQDVMNKLGGDILRLWVASTDYTGEIAVSDEILKRSADSYRRIR 656

Query: 660 NTARFLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLM 719
           NTARFLLANLNGF+P  D VA EDMV LDRWAV RA A Q++I +AY  Y+FH V Q+LM
Sbjct: 657 NTARFLLANLNGFEPSTDCVAPEDMVVLDRWAVGRALAAQKDIEQAYANYDFHEVVQRLM 716

Query: 720 QFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVWQ 779
           QFCS+E+GSFYLDIIKDRQYTAK +  ARRSCQ+ALFHIAEA+VRW+AP++SFTADE+W 
Sbjct: 717 QFCSVEMGSFYLDIIKDRQYTAKSDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWS 776

Query: 780 LLPGQRDAYVFTQEWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSL 839
            LPG+R  YVFT+EWY GL  +     ++DA+W  LL VR EVNKV+EQAR DKR+GGSL
Sbjct: 777 FLPGKRAQYVFTEEWYDGLFGLAEGEGMNDAFWAELLKVRGEVNKVLEQARADKRLGGSL 836

Query: 840 EAEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVETELA-SLKLVVNAT 898
           EA VTL+AD  L E+L  + DELRFVLLTS A+V PL DA +DA   EL   LK+  +  
Sbjct: 837 EAAVTLYADTELAERLNSLQDELRFVLLTSAARVAPLADAPADAQTAELVKGLKIAFSTA 896

Query: 899 TAEKCERCWHHREEVGTIEAHPTLCHRCVTNIEGDGEVRLFA 940
             EKC RCWH+  ++G +  H  LC RCV N+ GDGE R FA
Sbjct: 897 EGEKCPRCWHYTTDIGLVAEHADLCGRCVINVAGDGEKRKFA 938