Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1128 a.a., isoleucyl-tRNA synthetase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  271 bits (694), Expect = 1e-76
 Identities = 231/871 (26%), Positives = 387/871 (44%), Gaps = 142/871 (16%)

Query: 28  MLERWTKDGLYQQIRDSRIGRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGF 87
           +L+ W ++ ++++   +R G   F   +GPP ANG+  I H + + LKDI  + KT+ G+
Sbjct: 19  ILQYWQENKVFEKSVQNREGAETFTFFEGPPSANGTPGIHHVMARTLKDIFCRYKTLKGY 78

Query: 88  DAPYVPGWDCHGLPIELKVEQKVG----KPGQKISAAEFREECRKYAAEQVDGQREDFIR 143
                 GWD HGLP+EL+VE+++G      G+KIS  E+ ++CR+      D   +   +
Sbjct: 79  QVKRKGGWDTHGLPVELQVEKELGITKEDIGKKISVEEYNKKCRETVMRFKDEWDDLTEK 138

Query: 144 LGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYE 203
           +G   D  +PY+T D      +   L ++ +   L+KG     +    G+ L+  E+   
Sbjct: 139 IGYWVDLDDPYITFDPKYIETLWSLLKRLYDKDLLYKGYTIQPYSPAAGTGLSSHELNQP 198

Query: 204 DKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIWTTTPWTLPANRALSISPELDYSL 263
                     +  V   ++  +F V D  +   ++ WTTTPWTLP+N AL++  +LDY  
Sbjct: 199 G--------CYRDVKDTSITAQFKVKDRDNEY-IIAWTTTPWTLPSNSALAVGEKLDYVK 249

Query: 264 VEFVKDGVTHA---VILADVLVEACMTRYGAE-------------SHSVLAKIKGA---- 303
           V+   +  THA   VILA   + A   +  AE              + V+   KGA    
Sbjct: 250 VK-TFNPYTHAPQTVILAKARMGAFFNKKAAELKLEDYKAGDKLIPYEVVEAFKGADMLG 308

Query: 304 -------ALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGL- 355
                   ++ ++  HP  A+ V  I  D+VTT+ GTG+VH A   G DDF    + G+ 
Sbjct: 309 MEYEPLFPIDGIKLPHP--AYTV--IPADYVTTEDGTGIVHLAKAFGADDFRTLVQAGVP 364

Query: 356 ------EVAN--PVGD-NGVYKP----------------------DTEFFAGQHV----- 379
                 E  N  PV D  G + P                        +F+   ++     
Sbjct: 365 GVFVKDEQDNEIPVVDKKGKFLPVVGEYLLAKMKEHEITAHKEYTADDFYVKNYLKEDEN 424

Query: 380 ---FKANDNVVA-LLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNHNLRK 435
              +K  D +++ +LK +        Y HSYPHCWR   P+++     WFI        K
Sbjct: 425 AAEYKNTDVIISIILKNENKAFKVEKYEHSYPHCWRTDMPVLYYPLESWFIKT---TACK 481

Query: 436 QALSEIEQ-IQWIPD-WGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSV 493
             L E+ + I W P+  G  R    +EN  DW +SR R WG P+   V R  +      +
Sbjct: 482 DRLVELNKTINWKPEATGTGRFGNWLENLVDWNLSRSRFWGTPLP--VWRNEDATETKCI 539

Query: 494 SLMARVANRIEQEGIQAWWDLDAAELLGEEAEQYR-----------------KVTDTLDV 536
             +A +   IE+   + +  +  +   GEE + +R                 +  D +DV
Sbjct: 540 GSIAELTEEIEKSIAKGF--MQESPFKGEEIDLHRPYVDDVILVDSQGNKMFREPDLIDV 597

Query: 537 WYDSGSTFASVVAARPEFH-----------GHGVDLYLEGSDQHRGWFMSSLMISTAMTG 585
           W+DSG+          ++H            +  D   EG DQ RGWF +   I+  +  
Sbjct: 598 WFDSGA------MPYAQWHYPFENEEIFKANYPADYIAEGVDQTRGWFFTLHAIAVMLFD 651

Query: 586 KAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSD 645
              +K V+ +G  +D  G KMSK +GN + P +   + G D LR ++ +     +    +
Sbjct: 652 NVAFKNVIANGLVLDKNGNKMSKRLGNAVDPFKTLKEYGPDALRWYMLSNANPWDNLKFN 711

Query: 646 EILNRSADAYRR----IRNTARF--LLANLNGF--DPKNDLVAVEDMVALDRWAVRRAAA 697
             L   A+  RR    ++NT  F  L ANL+ F  DP    VAV +   LDRW V +  +
Sbjct: 712 --LEGVAEVQRRFFGTLQNTYNFFALYANLDAFTYDPAK-TVAVSERPELDRWIVSKLQS 768

Query: 698 LQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFH 757
           L +E+  + + Y+    T+ +M F   +L ++Y+ + + R +  +     +++    L+ 
Sbjct: 769 LIKEVESSMDNYDATRATRAIMNFTVDQLSNWYVRLARKRFWRGEM-NQDKQAAYETLYE 827

Query: 758 IAEAMVRWIAPVLSFTADEVW-QLLPGQRDA 787
              A+ + ++    F +D ++  L  G ++A
Sbjct: 828 CLMALSQLMSSFAPFYSDWMFANLTEGAKEA 858