Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 996 a.a., isoleucine--tRNA ligase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  670 bits (1729), Expect = 0.0
 Identities = 402/986 (40%), Positives = 546/986 (55%), Gaps = 80/986 (8%)

Query: 3   DYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTP--FILHDGPPYA 60
           DY+ T+ LPET FPMRG L  +EP +LE+W    LY  +R  R  +    ++LHDGPPYA
Sbjct: 15  DYRDTVFLPETPFPMRGGLPQKEPVILEQW--GDLYGTLRAERQQQNAPLYVLHDGPPYA 72

Query: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK---I 117
           NG IHIGH++NK LKD +V+S+ + G+D  YVPGWDCHGLPIE K+E++    G++   +
Sbjct: 73  NGDIHIGHALNKTLKDFVVRSRFLLGYDVDYVPGWDCHGLPIEWKIEEQFRAKGRRKDEV 132

Query: 118 SAAEFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGH 177
           S  EFR  CR+YA + +D Q++ F RLG++GD+ N Y TMDF +EA IV    K   +G 
Sbjct: 133 SKDEFRRACREYAGKYIDLQKDQFHRLGIVGDFANRYATMDFTSEAAIVAEFHKFKNSGQ 192

Query: 178 LHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSM 237
           L++G KPV W     +ALA+AE+EY D  SP I V F             ++  S + S+
Sbjct: 193 LYRGSKPVMWSPVERTALADAEIEYHDHVSPTIWVKFPVTAMSDDHPDDLLAFRSSTPSI 252

Query: 238 VIWTTTPWTLPANRALSISPELDYSLVEF--VKDGVTHA--------VILADVLVEACMT 287
           VIWTTTPWT+PANRA+S  PE+ Y L E   +++G+  A        +ILAD L E    
Sbjct: 253 VIWTTTPWTIPANRAISYGPEIAYGLYEVTAMEEGLEFAPWAKPGDRLILADKLAEEVFK 312

Query: 288 RYGAESHSVLAKIKGAALELVRFKHPFLAFD------VPAILGDHVTTDAGTGVVHTAPG 341
                + + +  I  + LE     HP  A D      VP + GDHVT DAGTG VHTAPG
Sbjct: 313 AAKIAAWTRVYDINPSGLETA---HPLAALDSGYGFSVPLLAGDHVTDDAGTGFVHTAPG 369

Query: 342 HGQDDFVVGQKYGL-EVANPVGDNGVYKPDTEFFAGQHVFK-----------ANDNVVAL 389
           HG DDF V + +G  EV + V  +G Y P    FAG  V +           AN  V+  
Sbjct: 370 HGADDFEVWKAHGHHEVPDTVDPDGAYYPGVPLFAGLKVLETEGKKTGKFGPANGAVMEK 429

Query: 390 LKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDN-----HNLRKQALSEIEQI 444
           L E G LL      HSYPH WR K PIIFR TPQWFI MD        LR+ AL+ I+  
Sbjct: 430 LIEAGNLLARGRLEHSYPHSWRSKAPIIFRNTPQWFIRMDQPLKSGDTLRETALNAIDAT 489

Query: 445 QWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRET-EELHPDSVSLMARVANRI 503
            + P  G++RI  MVE RPDW +SRQR WG P+ +F+ ++T + LH   V   AR+   +
Sbjct: 490 AFHPVAGKNRIRSMVEGRPDWLVSRQRAWGTPLAMFIDKQTGQPLHDPEVD--ARIVKAV 547

Query: 504 EQEGIQAWWDLDAAELLG-EEAEQYRKVTDTLDVWYDSGSTFASVVAARPEFHGHG---- 558
            + G   W+    ++ LG  +  +Y KV D LDVW+DSGST A  +  R   +G+     
Sbjct: 548 AEHGADIWFTAPDSDFLGAHDPARYEKVEDILDVWFDSGSTHAFTLDPRLPENGYTGDRP 607

Query: 559 ----VDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVI 614
                DLYLEGSDQHRGWF SSL+      G+AP+K VLTHGFT+D KG KMSKS GN  
Sbjct: 608 AHWPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPFKAVLTHGFTLDEKGEKMSKSKGNTT 667

Query: 615 APQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDP 674
            P  +  + GADILRLWVA  DYS +  +  +IL  + DAYR++RNT R+LL  L  FD 
Sbjct: 668 DPLTIIKESGADILRLWVALVDYSDDQRIGKQILQTTVDAYRKLRNTVRYLLGALADFD- 726

Query: 675 KNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDII 734
           + + + ++ M  L+R+ + R   L  ++  AY +Y F  V + +++FC+ +L + Y DI 
Sbjct: 727 EAERLPLDQMPPLERFILHRLHELDAQVRAAYGEYRFQDVVRPVLEFCAGDLSALYFDIR 786

Query: 735 KDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVWQLL---PGQRDAYVFT 791
           KD  Y  + +   RR+ ++ +  +   +  W+AP+  FT +E W       G   A V  
Sbjct: 787 KDALYCDRPDSLRRRAARTVMHEVFMRLTAWLAPLTPFTMEEAWTTRFPDAGSNCARVIP 846

Query: 792 Q---EWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSLEAEVTLFAD 848
               EW    ++ T  T L     +NLL +R  V   +E ARRDK +G SL+A+V +  D
Sbjct: 847 DTPAEW----ENETAYTKL-----KNLLPIREVVLGSLELARRDKMIGSSLDADVLIVLD 897

Query: 849 ATLTEQLTH--IGDEL--RFVLLTSEAKVLPLVDATSDAVET-----ELASLKLVVNATT 899
                QL     G E   +F+     A V  L        E      E A +  +V  + 
Sbjct: 898 DPALIQLVQDVAGSENPDQFMADFCIASVARLTRDDPQGPEVPFRLPEYAGIGALVRRSD 957

Query: 900 AEKCERCWHHREEVGTIEAHPTLCHR 925
             KC R W    +VG+  A+P L  R
Sbjct: 958 NPKCARSWRRVPDVGSDPAYPDLSAR 983