Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 938 a.a., isoleucyl-tRNA synthetase from Escherichia coli BL21

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 664/942 (70%), Positives = 775/942 (82%), Gaps = 6/942 (0%)

Query: 1   MSDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYA 60
           MSDYK TLNLPET FPMRG+LA REP ML RWT D LY  IR ++ G+  FILHDGPPYA
Sbjct: 1   MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYA 60

Query: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120
           NGSIHIGHSVNKILKDIIVKSK +SG+D+PYVPGWDCHGLPIELKVEQ+ GKPG+K +AA
Sbjct: 61  NGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAA 120

Query: 121 EFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHK 180
           EFR +CR+YAA QVDGQR+DFIRLGVLGDW +PYLTMDF TEANI+R+L K+I NGHLHK
Sbjct: 121 EFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHK 180

Query: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIW 240
           G KPVHWC DC SALAEAEVEY DKTSP+IDVAF AVD  A+  KF VS+ +  +S+VIW
Sbjct: 181 GAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIW 240

Query: 241 TTTPWTLPANRALSISPELDYSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKI 300
           TTTPWTLPANRA+SI+P+ DY+LV+   DG   AVILA  LVE+ M R G   +++L+ +
Sbjct: 241 TTTPWTLPANRAISIAPDFDYALVQI--DG--QAVILAKDLVESVMQRIGVTDYTILSTV 296

Query: 301 KGAALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP 360
           KGA LEL+RF HPF+ FDVPAILGDHVT DAGTG VHTAPGHG DD+V+GQKYGLE ANP
Sbjct: 297 KGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANP 356

Query: 361 VGDNGVYKPDT-EFFAGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFR 419
           VG +G Y P T     G +VFKAND VVALL+EKGALLH    +HSYP CWRHKTPIIFR
Sbjct: 357 VGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFR 416

Query: 420 ATPQWFISMDNHNLRKQALSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITL 479
           ATPQWF+SMD   LR Q+L EI+ +QWIPDWGQ+RIE MV NRPDWCISRQRTWGVP++L
Sbjct: 417 ATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSL 476

Query: 480 FVHRETEELHPDSVSLMARVANRIEQEGIQAWWDLDAAELLGEEAEQYRKVTDTLDVWYD 539
           FVH++TEELHP ++ LM  VA R+E  GIQAWWDLDA E+LG+EA+QY KV DTLDVW+D
Sbjct: 477 FVHKDTEELHPRTLELMEEVAKRVEVNGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFD 536

Query: 540 SGSTFASVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTV 599
           SGST +SVV  RPEF GH  D+YLEGSDQHRGWFMSSLMISTAM GKAPY+QVLTHGFTV
Sbjct: 537 SGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTV 596

Query: 600 DGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIR 659
           DG+GRKMSKSIGN ++PQ V NKLGADILRLWVA+TDY+GEM VSDEIL R+AD+YRRIR
Sbjct: 597 DGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIR 656

Query: 660 NTARFLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLM 719
           NTARFLLANLNGFDP  D+V  E+MV LDRWAV  A A Q++I++AYE Y+FH V Q+LM
Sbjct: 657 NTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLM 716

Query: 720 QFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVWQ 779
           +FCS+E+GSFYLDIIKDRQYTAK +  ARRSCQ+AL+HIAEA+VRW+AP+LSFTADEVW 
Sbjct: 717 RFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWG 776

Query: 780 LLPGQRDAYVFTQEWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSL 839
            LPG+R+ YVFT EWY+GL  +     ++DA+W+ LL VR EVNKVIEQAR DK+VGGSL
Sbjct: 777 YLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSL 836

Query: 840 EAEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVETE-LASLKLVVNAT 898
           EA VTL+A+  L  +LT +GDELRFVLLTS A V    DA +DA ++E L  LK+ ++  
Sbjct: 837 EAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKA 896

Query: 899 TAEKCERCWHHREEVGTIEAHPTLCHRCVTNIEGDGEVRLFA 940
             EKC RCWH+ ++VG +  H  +C RCV+N+ GDGE R FA
Sbjct: 897 EGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA 938