Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 175 a.a., KEGG: type IV fimbrial biogenesis protein FimT from Variovorax sp. SCN45

 Score = 60.5 bits (145), Expect = 1e-14
 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 6/160 (3%)

Query: 6   KGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGATV 65
           +GFTLVE+MV +A+  +LL++ +PSF+ + E  R       +    + AR++A   G TV
Sbjct: 20  RGFTLVEMMVVVALMTILLAIALPSFSGLIEKYRVEGMASALTASVSHARSEAARRGKTV 79

Query: 66  TVCPYAATPCGNDWTKGFSVYIENNGAKKVLKVIDGFSSKDTISLTGPTDKTVNFTPDGL 125
           T+   A    G DW+ G+   + +  A + L+  D    +  +   G +   ++F   G 
Sbjct: 80  TIQARAGC-SGRDWSCGWDTLVVSGDATETLRRQDP-DKRVAVERRGASG-AMSFDAMG- 135

Query: 126 VSTETSIIYCPSGESDGSK--SIKISTSGLIKEGSDNQSC 163
            S      + P G +D S   ++ IS  G ++    +  C
Sbjct: 136 SSDFARFSFYPVGNADSSNAATVCISLGGRLRRAKGDNEC 175