Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 191 a.a., Type IV fimbrial biogenesis protein FimT from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 42.7 bits (99), Expect = 3e-09
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 7   GFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGATV- 65
           G +L+EL+V IA+ A+L S+ +PSF +I    R     +        AR  A+  G  + 
Sbjct: 17  GTSLIELLVVIAVLAVLSSLAIPSFASIARQYRVNAVTEAFMASVQLARVDAMRLGQDIV 76

Query: 66  ----TVCPYAATPCGNDWTKGFSVYIENNGA 92
               T C  A  P   DW  G+ V+ + NG+
Sbjct: 77  LRRDTGC-IATLPTTADWRCGWRVFADLNGS 106