Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 183 a.a., Tfp pilus assembly protein FimT from Kangiella aquimarina DSM 16071

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 11/166 (6%)

Query: 6   KGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGATV 65
           KG TL+EL+VT+ +A +L  + +P         + + ++ K+      ARNQA++   ++
Sbjct: 6   KGLTLIELVVTLGLATILSLIALPHLQEFIAKQKVSADLLKLKSTIETARNQAISKKQSI 65

Query: 66  TVCPYAA---------TPCGNDWTKGFSVYIENNGAKKVLKVIDGFSSKDTISLTGPTDK 116
            +C   A           C +DW++   +  E+  AK+VL       S   +  +    K
Sbjct: 66  LICGTKAEVKQNLNEKLDCISDWSQVMVMKNEDAVAKEVLHFQQLEESYQLVKWSAFQRK 125

Query: 117 T-VNFTPDGLVSTETSIIY-CPSGESDGSKSIKISTSGLIKEGSDN 160
             +  TP G  + +   +Y C     +  +++ IS +G +    D+
Sbjct: 126 PYLELTPYGFTNHQNGTLYLCHKTYPNLHRAVTISKTGRVTINHDS 171