Pairwise Alignments

Query, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 431 a.a., NADH dehydrogenase from Pseudomonas putida KT2440

 Score =  363 bits (933), Expect = e-105
 Identities = 197/431 (45%), Positives = 268/431 (62%), Gaps = 5/431 (1%)

Query: 3   TKRIVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVAVGVIDQSIE 62
           T RIVIVGGGA GL LA++LG+ LG     ++ L+D +  HIWKP LHEVA G ++ S +
Sbjct: 2   THRIVIVGGGAGGLELATRLGKSLGKRKQAEITLVDTNLTHIWKPLLHEVAAGSLNSSED 61

Query: 63  GLLYRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALGG 122
            L Y      N + +  G +   D + K I+LAA   + G  LL  R + YD LV+A+G 
Sbjct: 62  ELNYVAQAKWNHFNFQLGRMSGLDREGKQIQLAATLDEEGRELLPARTLGYDTLVIAVGS 121

Query: 123 VSNSFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQLNE---TQEKVSIGIVGAGATGVE 179
            +N F TLGA QHC+FLD+   A  FHQ+LL+  L+ +      EK+S+ IVGAGATGVE
Sbjct: 122 NTNDFGTLGAAQHCLFLDTRKQAERFHQQLLNHYLRAHAGDVASEKISVAIVGAGATGVE 181

Query: 180 LAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIGIRLH 239
           LAAELHH    +  YG   I    + + LIEA P++LP LPER+S      L+K+G+++ 
Sbjct: 182 LAAELHHAAHELAAYGLDRIQPKDMHITLIEAGPRVLPALPERISVPVHKTLEKLGVKVM 241

Query: 240 IGVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDACMRV 299
               V EVT DG  T+DG++I+ASLKVWAAG++ P   ++   L     NQ+ V   ++ 
Sbjct: 242 TNAAVSEVTEDGLKTKDGEVIQASLKVWAAGIRAPGFLKDIDGLETNRINQLVVRPTLQT 301

Query: 300 KGQQDIYAIGDCALLIL-DSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEKPFVYKDYG 358
               +I+A GDCA      S + VPPRAQAA Q A  L +++  RL+ K    + YKDYG
Sbjct: 302 TRDDNIFAFGDCAACPQPGSDRNVPPRAQAAHQQASMLAQSLKARLENKALPTYEYKDYG 361

Query: 359 SLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAIIYRIAQKL 418
           SLVSLSRFSAVGNLMGNL  G+  +EG +AR+ Y+SLY+ H  +LYG+F   +  +  K+
Sbjct: 362 SLVSLSRFSAVGNLMGNL-MGSVKLEGWLARMFYVSLYRMHQMALYGFFRTALMMLGSKI 420

Query: 419 LKWQRPKLKLH 429
            +   P+LKLH
Sbjct: 421 GRGTEPRLKLH 431