Pairwise Alignments

Query, 324 a.a., methyl-accepting chemotaxis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 7/106 (6%)

Query: 206 RTQQATGEIQKVQSRVAE-TDSVMQASQTLSNQGVN---RSEEIKLVLSKVTDLVSNISN 261
           RTQ +T EIQK+ S +     SVMQ++     Q      +++E    ++ + +L+++IS+
Sbjct: 423 RTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEAGQAMAAILELIAHISD 482

Query: 262 MNIEVSHAAQEQTCVTEAISR---TLNDLANVSGSASLDSEHLAQS 304
           MN +++ A +EQ+ VTE I+R    +++L  VS  A+  +   AQS
Sbjct: 483 MNTQLASATEEQSLVTEEINRNICNISELTEVSVKANESNSRAAQS 528



 Score = 30.8 bits (68), Expect = 8e-05
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 15/150 (10%)

Query: 150 LLIIRKTDEAKFAKSFGAVSHTNHHQVPAQLKETEAAVT----VISQLSASANDIVINTI 205
           LL +    EA  A S G        +V A    T+ +      +IS++      ++ +  
Sbjct: 391 LLALNAAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNS 450

Query: 206 RTQQATGEIQ-KVQSRVAETDSVMQASQTLSN---QGVNRSEEIKLVLSKVTDLVSNISN 261
           +TQ+ + E+Q K Q       ++++    +S+   Q  + +EE  LV  ++   + NIS 
Sbjct: 451 QTQRQSEELQAKAQEAGQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISE 510

Query: 262 M-------NIEVSHAAQEQTCVTEAISRTL 284
           +       N   S AAQ    +++ +S TL
Sbjct: 511 LTEVSVKANESNSRAAQSLQDISQDMSHTL 540